Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g15160 Coffea canephora HOM05D001250 ORTHO05D000627 3.0e-125 451.8 220 100.0
PGSC0003DMG402024472 Solanum tuberosum HOM05D001250 ORTHO05D000627 8.6e-24 114.8 198 37.4
CAN.G853.10 Capsicum annuum HOM05D001250 ORTHO05D000627 8.0e-22 108.2 185 35.7
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 3.0e-21 106.3 164 38.4
Nitab4.5_0001642g0060 Nicotiana tabacum HOM05D001250 ORTHO05D000627 5.7e-20 102.1 167 38.9
Solyc03g113890.1 Solanum lycopersicum HOM05D001250 ORTHO05D000627 5.7e-20 102.1 164 37.8
TAR629G2542 Trochodendron aralioides HOM05D001250 ORTHO05D000627 4.6e-17 92.4 218 33.0
TAR374G0543 Trochodendron aralioides HOM05D001250 ORTHO05D000627 5.9e-17 92.0 223 32.3
Rhsim12G0050500 Rhododendron simsii HOM05D001250 ORTHO05D000627 3.6e-14 82.8 205 33.7
TAR622G0054 Trochodendron aralioides HOM05D001250 ORTHO05D000627 3.6e-14 82.8 190 33.2
Nn4g22907 Nelumbo nucifera HOM05D001250 ORTHO05D000627 1.8e-13 80.5 195 32.8
PSO591G0228 Papaver somniferum HOM05D001250 ORTHO05D000627 3.1e-13 79.7 230 29.1
Cc11_g14160 Coffea canephora HOM05D001250 ORTHO05D000627 6.8e-13 78.6 211 33.6
Lsat_1_v5_gn_4_73321 Lactuca sativa HOM05D007129 ORTHO05D008680 1.5e-12 77.4 206 32.5
QL10p012430 Quercus lobata HOM05D001250 ORTHO05D000627 2.6e-12 76.6 199 32.7
Aqoxy3G03102 Aquilegia oxysepala HOM05D001250 ORTHO05D000627 3.4e-12 76.3 119 39.5
PSO832G4141 Papaver somniferum HOM05D001250 ORTHO05D000627 3.4e-12 76.3 230 28.3
Nn3g16998 Nelumbo nucifera HOM05D001250 ORTHO05D000627 4.4e-12 75.9 186 30.6
Oeu026673.1 Olea europaea HOM05D001250 ORTHO05D000627 4.4e-12 75.9 111 44.1
TAR371G0161 Trochodendron aralioides HOM05D001250 ORTHO05D000627 4.4e-12 75.9 136 36.0
Hma1.2p1_1049F.1_g251840 Hydrangea macrophylla HOM05D001250 ORTHO05D000627 5.8e-12 75.5 180 31.1
Lj6P800T20 Lonicera japonica HOM05D001250 ORTHO05D000627 5.8e-12 75.5 157 35.0
GSVIVG01020155001 Vitis vinifera HOM05D001250 ORTHO05D000627 5.8e-12 75.5 201 32.8
CiPaw.05G145900 Carya illinoinensis HOM05D001250 ORTHO05D000627 1.7e-11 73.9 227 29.5
Haze_12128 Corylus avellana HOM05D001250 ORTHO05D000627 2.2e-11 73.6 151 35.8
DCAR_026559 Daucus carota HOM05D001250 ORTHO05D000627 2.2e-11 73.6 126 35.7
VMungo1215G1309 Vigna mungo HOM05D001250 ORTHO05D000627 3.7e-11 72.8 144 34.0
Glyma.01G036600 Glycine max HOM05D001250 ORTHO05D000627 4.9e-11 72.4 153 32.7
Oeu017600.1 Olea europaea HOM05D001250 ORTHO05D000627 6.4e-11 72.0 131 39.7
PSO478G5026 Papaver somniferum HOM05D001250 ORTHO05D000627 6.4e-11 72.0 190 30.5
Ciclev10032466m.g Citrus clementina HOM05D001250 ORTHO05D000627 8.3e-11 71.6 145 34.5
Gohir.A03G143001 Gossypium hirsutum HOM05D001250 ORTHO05D000627 8.3e-11 71.6 182 30.8
Sabra10G0028700 Salix brachista HOM05D001250 ORTHO05D000627 8.3e-11 71.6 126 38.1
Sc11g0001400 Simmondsia chinensis HOM05D001250 ORTHO05D000627 8.3e-11 71.6 138 34.1
Manes.01G196000 Manihot esculenta HOM05D001250 ORTHO05D000627 1.1e-10 71.2 138 34.8
Peaxi162Scf01141g00013 Petunia axillaris HOM05D001250 ORTHO05D000627 1.1e-10 71.2 173 29.5
Duzib251G0738 Durio zibethinus HOM05D001250 ORTHO05D000627 1.4e-10 70.9 203 31.0
Duzib268G1574 Durio zibethinus HOM05D001250 ORTHO05D000627 1.4e-10 70.9 189 31.2
Peaxi162Scf01206g00012 Petunia axillaris HOM05D001250 ORTHO05D000627 1.4e-10 70.9 125 37.6
Glyma.02G029400 Glycine max HOM05D001250 ORTHO05D000627 1.9e-10 70.5 144 35.4
Potri.010G036400 Populus trichocarpa HOM05D001250 ORTHO05D000627 2.4e-10 70.1 140 36.4
Thecc.02G240900 Theobroma cacao HOM05D001250 ORTHO05D000627 2.4e-10 70.1 193 32.1
Nitab4.5_0000257g0090 Nicotiana tabacum HOM05D001250 ORTHO05D000627 3.2e-10 69.7 147 33.3
Nitab4.5_0010523g0020 Nicotiana tabacum HOM05D001250 ORTHO05D000627 3.2e-10 69.7 150 33.3
Phvul.002G075900 Phaseolus vulgaris HOM05D001250 ORTHO05D000627 4.1e-10 69.3 124 36.3
DCAR_024520 Daucus carota HOM05D001250 ORTHO05D000627 5.4e-10 68.9 140 32.1
Duzib248G0418 Durio zibethinus HOM05D001250 ORTHO05D000627 5.4e-10 68.9 184 29.9
Gorai.005G186400 Gossypium raimondii HOM05D001250 ORTHO05D000627 5.4e-10 68.9 186 29.6
Nitab4.5_0006492g0010 Nicotiana tabacum HOM05D001250 ORTHO05D000627 5.4e-10 68.9 137 33.6
Eucgr.B02564 Eucalyptus grandis HOM05D001250 ORTHO05D000627 1.2e-09 67.8 123 35.8
Gohir.D02G166300 Gossypium hirsutum HOM05D001250 ORTHO05D000627 1.2e-09 67.8 186 29.6
TWI75G0118 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 1.2e-09 67.8 121 37.2
TWI75G0561 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 1.2e-09 67.8 121 37.2
TWI75G1804 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 1.2e-09 67.8 121 37.2
Cpa.g.sc5.339 Carica papaya HOM05D001250 ORTHO05D000627 1.6e-09 67.4 122 37.7
Duzib068G0272 Durio zibethinus HOM05D001250 ORTHO05D000627 1.6e-09 67.4 198 29.8
CAN.G159.18 Capsicum annuum HOM05D001250 ORTHO05D000627 2.7e-09 66.6 151 30.5
COL.COLO4_04323 Corchorus olitorius HOM05D001250 ORTHO05D000627 2.7e-09 66.6 201 28.4
Nitab4.5_0000034g0090 Nicotiana tabacum HOM05D001250 ORTHO05D000627 2.7e-09 66.6 109 37.6
Oeu012246.1 Olea europaea HOM05D001250 ORTHO05D000627 2.7e-09 66.6 138 34.1
CANSAT80G1583 Cannabis sativa HOM05D001250 ORTHO05D000627 3.5e-09 66.2 123 38.2
Dinv09179 Davidia involucrata HOM05D007129 ORTHO05D008680 3.5e-09 66.2 163 33.7
TPR.G13949 Trifolium pratense HOM05D001250 ORTHO05D000627 4.6e-09 65.9 136 33.1
COL.COLO4_37888 Corchorus olitorius HOM05D001250 ORTHO05D000627 6.0e-09 65.5 182 28.0
Lj2g0019425 Lotus japonicus HOM05D001250 ORTHO05D000627 6.0e-09 65.5 154 31.8
Manes.05G093100 Manihot esculenta HOM05D001250 ORTHO05D000627 6.0e-09 65.5 127 37.0
Psat2g113200 Pisum sativum HOM05D001250 ORTHO05D000627 6.0e-09 65.5 206 31.1
Rhsim12G0125200 Rhododendron simsii HOM05D001250 ORTHO05D000627 6.0e-09 65.5 166 30.7
FAN12G1641 Fragaria x ananassa HOM05D001250 ORTHO05D000627 7.8e-09 65.1 142 31.0
Lalb_Chr05g0217241 Lupinus albus HOM05D001250 ORTHO05D000627 7.8e-09 65.1 184 32.1
Dinv24910 Davidia involucrata HOM05D001250 ORTHO05D000627 1.0e-08 64.7 221 29.0
FvH4_4g35130 Fragaria vesca HOM05D001250 ORTHO05D000627 1.0e-08 64.7 142 31.0
FAN07G0319 Fragaria x ananassa HOM05D001250 ORTHO05D000627 1.0e-08 64.7 142 31.0
FAN17G0792 Fragaria x ananassa HOM05D001250 ORTHO05D000627 1.0e-08 64.7 142 31.0
ATR1149G134 Amborella trichopoda HOM05D001250 ORTHO05D000627 1.3e-08 64.3 191 28.8
Eucgr.B03372 Eucalyptus grandis HOM05D001250 ORTHO05D000627 1.3e-08 64.3 165 33.9
Lsat_1_v5_gn_8_160440 Lactuca sativa HOM05D001250 ORTHO05D000627 1.3e-08 64.3 143 33.6
Sed0027507 Sechium edule HOM05D001250 ORTHO05D000627 1.3e-08 64.3 143 32.2
QL03p067113 Quercus lobata HOM05D001250 ORTHO05D000627 1.7e-08 63.9 224 27.7
Actinidia08184 Actinidia chinensis HOM05D001250 ORTHO05D000627 2.3e-08 63.5 142 33.1
ClCG05G024980 Citrullus lanatus HOM05D001250 ORTHO05D000627 3.0e-08 63.2 149 30.9
DCAR_000151 Daucus carota HOM05D001250 ORTHO05D000627 3.9e-08 62.8 152 28.3
MD13G1086000 Malus domestica HOM05D001250 ORTHO05D000627 3.9e-08 62.8 191 30.4
Gorai.008G158200 Gossypium raimondii HOM05D001250 ORTHO05D000627 6.6e-08 62.0 166 29.5
Prupe.1G260700 Prunus persica HOM05D001250 ORTHO05D000627 6.6e-08 62.0 131 32.8
AUR62032101 Chenopodium quinoa HOM05D001250 ORTHO05D000627 1.1e-07 61.2 67 47.8
HanXRQChr15g0476601 Helianthus annuus HOM05D001250 ORTHO05D000627 1.1e-07 61.2 115 35.7
CSS0048728 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 1.5e-07 60.8 173 31.8
FAN22G0402 Fragaria x ananassa HOM05D001250 ORTHO05D000627 1.5e-07 60.8 128 30.5
HanXRQChr12g0371271 Helianthus annuus HOM05D001250 ORTHO05D000627 1.5e-07 60.8 120 35.8
vmacro16289 Vaccinium macrocarpon HOM05D001250 ORTHO05D000627 1.5e-07 60.8 110 33.6
HanXRQChr08g0209051 Helianthus annuus HOM05D001250 ORTHO05D000627 1.9e-07 60.5 139 32.4
Ca_11147_v3 Cicer arietinum L. HOM05D001250 ORTHO05D000627 3.3e-07 59.7 184 28.8
Hma1.2p1_0160F.1_g070570 Hydrangea macrophylla HOM05D001250 ORTHO05D000627 3.3e-07 59.7 110 31.8
TWI18G0415 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 3.3e-07 59.7 113 39.8
MELO3C012028.2 Cucumis melo HOM05D001250 ORTHO05D000627 4.3e-07 59.3 103 34.0
Glyma.20G117800 Glycine max HOM05D001250 ORTHO05D000627 4.3e-07 59.3 174 29.3
MD16G1085400 Malus domestica HOM05D001250 ORTHO05D000627 4.3e-07 59.3 133 31.6
Potri.008G193400 Populus trichocarpa HOM05D001250 ORTHO05D000627 4.3e-07 59.3 132 28.8
AUR62037860 Chenopodium quinoa HOM05D001250 ORTHO05D000627 5.6e-07 58.9 67 46.3
Oeu018288.1 Olea europaea HOM05D001250 ORTHO05D000627 5.6e-07 58.9 115 33.0
CiPaw.06G075500 Carya illinoinensis HOM05D001250 ORTHO05D000627 7.3e-07 58.5 114 36.8
Hma1.2p1_0002F.1_g002780 Hydrangea macrophylla HOM05D001250 ORTHO05D000627 7.3e-07 58.5 183 27.9
Oeu013599.1 Olea europaea HOM05D001250 ORTHO05D000627 7.3e-07 58.5 124 32.3
CDE04G0840 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 9.5e-07 58.2 124 31.5
TWI36G0426 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 9.5e-07 58.2 113 34.5
Potri.010G122400 Populus trichocarpa HOM05D001250 ORTHO05D000627 1.2e-06 57.8 108 33.3
Gohir.D12G147000 Gossypium hirsutum HOM05D001250 ORTHO05D000627 1.6e-06 57.4 148 29.7
MSTRG.629 Avicennia marina HOM05D001250 ORTHO05D000627 2.1e-06 57.0 112 36.6
EL10Ac6g13753 Beta vulgaris HOM05D001250 ORTHO05D000627 2.8e-06 56.6 58 44.8
Sopen05g002280 Solanum pennellii HOM05D001250 ORTHO05D000627 2.8e-06 56.6 139 29.5
Gohir.A12G142100 Gossypium hirsutum HOM05D001250 ORTHO05D000627 3.6e-06 56.2 166 28.3
Sabra10G0092500 Salix brachista HOM05D001250 ORTHO05D000627 3.6e-06 56.2 108 33.3
TPR.G8383 Trifolium pratense HOM05D010505 ORTHO05D014594 3.6e-06 56.2 59 42.4
HPP92_017351 Vanilla planifolia HOM05D001250 ORTHO05D000627 3.6e-06 56.2 86 34.9
CAN.G610.61 Capsicum annuum HOM05D001250 ORTHO05D000627 4.7e-06 55.8 148 29.1
SGA_v2.0_scaffold166G38329 Striga asiatica HOM05D001250 ORTHO05D000627 4.7e-06 55.8 137 27.7
unitig_37.g12407 Utricularia gibba HOM05D001250 ORTHO05D000627 4.7e-06 55.8 59 47.5
Ah.11g046240 Amaranthus hybridus HOM05D001250 ORTHO05D000627 6.2e-06 55.5 66 45.5
MSTRG.7865 Avicennia marina HOM05D001250 ORTHO05D000627 6.2e-06 55.5 112 38.4
PSO017G0327 Papaver somniferum HOM05D001250 ORTHO05D000627 6.2e-06 55.5 165 27.9
SGA_v2.0_scaffold63G21690 Striga asiatica HOM05D001250 ORTHO05D000627 6.2e-06 55.5 188 28.7
THA.LOC104817063 Tarenaya hassleriana HOM05D001250 ORTHO05D000627 6.2e-06 55.5 77 40.3
BcaB03g15906 Brassica carinata HOM05D001250 ORTHO05D000627 8.1e-06 55.1 95 32.6
CSS0019313 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 8.1e-06 55.1 126 32.5


User provided reference genes

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