Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 0.0e+00 1080.5 571 100.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.7e-236 822.8 569 75.9
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.8e-230 802.7 570 74.6
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.7e-230 800.8 566 75.8
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 5.7e-229 797.7 566 75.4
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 5.5e-224 781.2 568 73.1
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 7.2e-224 780.8 570 73.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 3.6e-223 778.5 568 72.9
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 5.2e-222 774.6 568 72.7
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.3e-220 770.0 568 71.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 4.1e-219 765.0 591 68.4
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 3.5e-218 761.9 569 72.2
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 5.5e-216 754.6 569 69.9
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 9.4e-216 753.8 569 69.8
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 6.8e-214 747.7 559 70.5
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 8.8e-214 747.3 567 70.4
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.5e-213 746.5 569 70.3
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.6e-213 745.7 567 70.7
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 9.8e-213 743.8 566 68.9
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.7e-212 743.0 569 68.2
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.2e-212 742.7 568 69.2
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 4.8e-212 741.5 569 68.7
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.3e-212 740.7 568 68.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.4e-211 739.2 569 68.9
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.1e-211 738.8 568 68.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.2e-210 736.9 567 67.2
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.0e-210 736.1 568 69.9
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.0e-210 736.1 587 66.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 3.5e-210 735.3 570 68.9
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 3.5e-210 735.3 567 68.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 7.7e-210 734.2 564 70.2
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.3e-209 733.4 566 68.4
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 2.9e-209 732.3 554 69.7
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 3.8e-209 731.9 563 68.4
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 3.8e-209 731.9 568 69.2
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 5.0e-209 731.5 569 67.3
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 6.6e-209 731.1 568 69.2
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.5e-208 729.9 565 68.1
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 7.2e-208 727.6 567 69.1
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 3.6e-207 725.3 567 69.1
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 3.6e-207 725.3 568 69.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 4.7e-207 724.9 569 68.7
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.0e-206 723.8 567 69.1
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.0e-206 723.8 569 67.7
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.8e-206 723.0 569 66.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-206 723.0 569 68.7
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.0e-206 722.2 570 68.8
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.6e-205 719.2 567 68.8
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 9.8e-205 717.2 569 67.5
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.2e-204 716.1 569 66.4
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-203 713.8 582 67.2
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.4e-203 713.4 568 66.4
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.4e-203 713.4 569 67.3
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.4e-203 713.4 569 68.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 7.0e-203 711.1 568 68.0
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.2e-202 710.3 568 65.5
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.5e-202 708.8 568 65.8
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.0e-201 707.2 566 68.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.3e-201 706.8 573 66.8
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.7e-201 706.4 568 68.1
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.3e-201 706.1 566 66.1
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.9e-201 705.7 574 65.7
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 3.9e-201 705.3 568 65.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 4.3e-200 701.8 568 65.1
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.6e-200 701.4 567 67.9
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 9.5e-200 700.7 567 65.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 8.0e-199 697.6 572 64.9
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 8.0e-199 697.6 569 66.1
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.4e-198 696.8 569 65.7
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.3e-198 696.0 569 65.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 3.1e-198 695.7 637 60.4
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 3.1e-198 695.7 568 65.7
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 8.9e-198 694.1 567 64.7
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.2e-197 693.7 567 65.3
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 3.4e-197 692.2 567 64.7
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.9e-196 689.1 567 64.0
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.9e-195 686.4 567 63.5
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 3.5e-194 682.2 567 64.0
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 7.3e-192 674.5 525 68.6
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.4e-187 660.2 483 72.3
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.5e-186 655.6 568 62.7
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 6.6e-185 651.4 529 65.6
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 4.7e-183 645.2 567 62.1
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 4.7e-183 645.2 567 62.1
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.4e-182 643.7 567 61.9
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 3.1e-182 642.5 567 62.3
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 3.1e-182 642.5 567 62.3
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 3.1e-182 642.5 573 60.0
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.2e-181 640.6 571 62.0
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.4e-179 633.6 563 61.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.1e-175 619.8 580 57.9
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 5.2e-174 615.1 568 60.4
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 6.8e-174 614.8 528 62.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 6.4e-172 608.2 636 53.6
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.1e-160 570.9 509 60.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.9e-144 516.9 413 65.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 3.3e-128 463.0 451 57.4
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.8e-121 440.7 584 43.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 3.0e-121 439.9 563 45.8
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.0e-108 398.3 407 56.5
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.0e-105 388.3 585 39.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.3e-103 381.3 310 68.7
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.5e-101 373.2 238 81.1
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.5e-101 372.9 564 41.5
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 7.5e-96 355.5 596 38.1
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.7e-93 345.5 302 65.9
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.3e-92 344.7 225 76.4
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.9e-75 287.7 253 64.4
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.1e-70 271.9 259 57.1
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.4e-70 271.6 375 47.2
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.0e-68 263.8 174 71.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 8.4e-55 219.2 152 77.6
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-50 204.5 202 58.9
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 6.2e-50 203.0 586 30.5
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 4.5e-40 170.2 151 59.6
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 4.8e-34 150.2 155 61.9
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-25 121.7 71 77.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 2.1e-13 81.6 54 79.6
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 4.1e-09 67.4 47 74.5


User provided reference genes

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