Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 3.2e-57 224.9 118 100.0
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-53 212.6 117 94.9
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 8.9e-52 206.8 117 94.0
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 4.1e-49 198.0 118 89.0
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 6.8e-44 180.6 114 83.3
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 7.5e-43 177.2 114 82.5
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 9.8e-43 176.8 114 81.6
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 1.3e-42 176.4 114 80.7
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.3e-42 176.4 114 79.8
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 2.9e-42 175.3 118 78.0
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.4e-41 172.9 114 79.8
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 5.4e-41 171.0 114 78.9
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.6e-40 169.5 116 77.6
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 2.7e-40 168.7 114 77.2
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.5e-40 168.3 114 78.1
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.5e-40 168.3 114 77.2
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 3.5e-40 168.3 115 78.3
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 7.8e-40 167.2 115 76.5
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.0e-39 166.8 114 76.3
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 1.0e-39 166.8 114 76.3
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.3e-39 166.4 114 77.2
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.3e-39 166.4 114 78.1
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 1.3e-39 166.4 115 75.7
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.7e-39 166.0 114 77.2
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 1.7e-39 166.0 114 75.4
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.3e-39 165.6 114 76.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.0e-39 165.2 115 75.7
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.0e-39 165.2 115 75.7
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 6.6e-39 164.1 113 75.2
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 6.6e-39 164.1 114 76.3
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 8.6e-39 163.7 114 75.4
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.1e-38 163.3 115 74.8
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.9e-38 162.5 114 73.7
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 2.5e-38 162.2 115 73.0
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 2.5e-38 162.2 115 73.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.3e-38 161.4 115 73.0
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.3e-38 161.4 115 73.0
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 5.6e-38 161.0 114 72.8
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.2e-37 159.8 114 73.7
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.6e-37 159.5 115 76.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.6e-37 159.5 115 69.6
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 2.1e-37 159.1 115 73.0
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 2.8e-37 158.7 114 73.7
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 3.6e-37 158.3 114 73.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.6e-37 158.3 114 73.7
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 4.7e-37 157.9 114 73.7
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.7e-37 157.9 115 71.3
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 6.2e-37 157.5 115 73.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 6.2e-37 157.5 115 71.3
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 8.1e-37 157.1 113 74.3
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 8.1e-37 157.1 114 72.8
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.4e-36 156.4 114 70.2
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.8e-36 156.0 114 72.8
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.1e-36 155.2 115 71.3
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 4.0e-36 154.8 113 75.2
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 5.2e-36 154.5 114 72.8
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.2e-35 153.3 116 69.8
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.2e-35 153.3 114 71.1
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.0e-35 152.5 114 70.2
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 2.6e-35 152.1 109 71.6
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.6e-35 152.1 109 73.4
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 3.4e-35 151.8 114 68.4
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 4.4e-35 151.4 109 71.6
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 4.4e-35 151.4 109 71.6
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 4.4e-35 151.4 109 73.4
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 5.8e-35 151.0 109 70.6
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 5.8e-35 151.0 109 70.6
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 5.8e-35 151.0 114 72.8
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 5.8e-35 151.0 114 66.7
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 7.6e-35 150.6 112 71.4
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 9.9e-35 150.2 114 67.5
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 9.9e-35 150.2 114 71.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 9.9e-35 150.2 114 68.4
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 9.9e-35 150.2 114 70.2
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.3e-34 149.8 114 66.7
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.7e-34 149.4 115 68.7
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 2.9e-34 148.7 115 68.7
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 4.9e-34 147.9 110 71.8
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 8.4e-34 147.1 110 70.9
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.1e-33 146.7 116 69.8
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 4.1e-33 144.8 114 71.1
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 5.4e-33 144.4 115 68.7
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 5.4e-33 144.4 114 65.8
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 7.1e-33 144.1 114 68.4
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 7.1e-33 144.1 117 69.2
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 1.2e-32 143.3 130 63.1
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.7e-32 142.1 109 68.8
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 2.7e-32 142.1 115 67.0
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 4.6e-32 141.4 138 61.6
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 7.8e-32 140.6 89 80.9
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.3e-31 139.8 109 67.0
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 2.3e-31 139.0 114 65.8
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 3.9e-31 138.3 116 66.4
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 6.6e-31 137.5 97 70.1
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 8.6e-31 137.1 109 67.9
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 8.6e-31 137.1 109 67.9
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 8.6e-31 137.1 109 67.9
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 8.6e-31 137.1 109 67.9
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 2.5e-30 135.6 126 62.7
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 4.3e-30 134.8 115 68.7
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.2e-29 133.3 114 64.9
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.6e-29 132.9 114 60.5
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.7e-29 131.3 110 64.5
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 4.7e-29 131.3 113 61.9
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 2.4e-28 129.0 113 60.2
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 5.2e-28 127.9 116 64.7
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.2e-28 127.9 116 64.7
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.2e-28 127.9 116 64.7
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.2e-27 126.7 116 63.8
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 5.8e-27 124.4 112 60.7
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 7.6e-27 124.0 111 62.2
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.9e-26 122.1 110 64.5
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 1.9e-25 119.4 111 60.4
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.9e-25 119.4 113 55.8
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 3.2e-25 118.6 115 55.7
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 3.2e-25 118.6 115 55.7
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 3.2e-25 118.6 115 58.3
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.2e-24 116.7 114 56.1
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.7e-24 115.5 89 67.4
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.7e-23 112.8 89 69.7
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 3.9e-23 111.7 119 56.3
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.9e-22 109.4 115 59.1
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 2.1e-21 105.9 169 45.0
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 9.9e-19 97.1 121 47.9
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.2e-16 90.1 61 75.4
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.9e-15 85.1 114 50.0
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.1e-12 77.0 61 68.9
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.9e-10 68.9 102 44.1
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.8e-10 68.6 96 44.8
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.8e-10 68.6 96 44.8
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.4e-10 67.8 121 39.7
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.2e-08 63.5 109 40.4
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 2.1e-08 62.8 66 56.1
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 3.3e-06 55.5 108 38.0


User provided reference genes

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