Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 3.4e-211 738.0 367 100.0
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 1.2e-182 643.3 360 91.7
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 7.3e-36 155.6 373 33.5
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 1.8e-34 151.0 372 33.6
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.4e-33 146.4 412 29.4
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 9.9e-33 145.2 521 27.6
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 2.4e-31 140.6 371 31.3
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 5.4e-31 139.4 400 33.2
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 9.2e-31 138.7 373 31.4
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 4.6e-30 136.3 378 33.1
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 7.8e-30 135.6 377 32.4
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 5.1e-29 132.9 169 46.7
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 2.5e-28 130.6 364 31.9
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 1.6e-27 127.9 364 31.9
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 6.2e-27 125.9 387 32.0
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 8.1e-27 125.6 170 46.5
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 1.8e-26 124.4 371 30.5
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 1.8e-26 124.4 164 43.9
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 1.2e-25 121.7 349 33.5
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 7.6e-25 119.0 212 40.6
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 2.9e-24 117.1 435 28.5
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 4.9e-24 116.3 188 38.8
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 4.9e-24 116.3 277 34.3
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 5.4e-23 112.8 145 46.9
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.2e-22 111.7 427 27.2
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 3.5e-22 110.2 407 28.0
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 4.6e-22 109.8 368 28.0
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 4.6e-22 109.8 403 30.0
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 6.0e-22 109.4 481 26.8
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 7.8e-22 109.0 474 26.6
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 7.8e-22 109.0 145 45.5
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 2.3e-21 107.5 470 27.7
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.3e-21 107.5 163 41.7
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 5.1e-21 106.3 278 33.5
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 1.5e-20 104.8 381 30.2
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.5e-20 104.8 434 25.6
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 1.9e-20 104.4 161 42.9
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 4.3e-20 103.2 234 34.6
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 5.6e-20 102.8 338 33.4
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 1.3e-19 101.7 340 33.2
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 1.6e-19 101.3 158 37.3
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 2.1e-19 100.9 327 31.5
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 2.1e-19 100.9 201 36.8
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 2.8e-19 100.5 235 33.2
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 2.8e-19 100.5 166 37.3
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 3.6e-19 100.1 253 32.4
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 3.6e-19 100.1 287 32.8
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 1.4e-18 98.2 320 28.4
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 2.4e-18 97.4 383 26.4
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 3.1e-18 97.1 160 41.2
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 3.1e-18 97.1 161 43.5
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.0e-18 96.7 105 51.4
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 5.3e-18 96.3 295 30.2
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 6.9e-18 95.9 154 39.0
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 9.0e-18 95.5 187 33.2
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 9.0e-18 95.5 163 43.6
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 1.2e-17 95.1 427 28.3
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.2e-17 95.1 148 43.2
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 2.0e-17 94.4 172 36.6
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 2.6e-17 94.0 164 42.7
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 3.4e-17 93.6 150 41.3
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 5.8e-17 92.8 368 25.8
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 7.6e-17 92.4 187 33.2
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 7.6e-17 92.4 187 33.2
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 2.2e-16 90.9 234 35.9
MBI12_g20086_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 2.9e-16 90.5 374 26.2
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 3.8e-16 90.1 168 37.5
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 3.8e-16 90.1 187 32.1
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 8.4e-16 89.0 194 34.5
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 8.4e-16 89.0 196 35.7
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 8.4e-16 89.0 141 41.1
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 1.9e-15 87.8 346 26.6
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 3.2e-15 87.0 195 34.4
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 4.2e-15 86.7 372 26.9
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 7.1e-15 85.9 131 43.5
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 7.1e-15 85.9 355 29.0
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 1.2e-14 85.1 133 42.1
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 1.2e-14 85.1 386 25.4
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 1.6e-14 84.7 366 26.0
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 4.6e-14 83.2 380 26.1
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 5.1e-13 79.7 367 25.3
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 5.1e-13 79.7 274 30.3
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 5.1e-13 79.7 242 32.2
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 8.7e-13 79.0 257 31.1
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 8.7e-13 79.0 277 30.0
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 1.5e-12 78.2 134 39.6
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 2.5e-12 77.4 374 25.7
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 9.6e-12 75.5 360 23.9
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 9.6e-12 75.5 360 23.9
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 1.6e-11 74.7 257 27.6
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 3.7e-11 73.6 60 65.0
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 8.1e-11 72.4 246 26.8
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 1.4e-10 71.6 362 25.1
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 6.9e-10 69.3 265 27.9
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 9.0e-10 68.9 371 25.1
Ah.07g204540 Amaranthus hybridus HOM05D006657 ORTHO05D005964 1.2e-09 68.6 231 26.4
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 2.6e-09 67.4 367 25.6
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 4.5e-09 66.6 208 32.7
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 4.5e-09 66.6 208 32.7
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 5.8e-09 66.2 208 32.7
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 9.9e-09 65.5 163 33.1
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 9.9e-09 65.5 122 37.7
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 1.7e-08 64.7 133 36.8
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 2.9e-08 63.9 142 34.5
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 6.4e-08 62.8 102 37.3
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 1.4e-07 61.6 67 49.3
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 1.4e-07 61.6 67 49.3
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 1.9e-07 61.2 67 49.3
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 2.4e-07 60.8 69 46.4
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 3.2e-07 60.5 100 36.0
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 3.2e-07 60.5 122 36.1
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 9.3e-07 58.9 67 47.8
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 1.2e-06 58.5 68 44.1
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 1.2e-06 58.5 68 44.1
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 1.2e-06 58.5 122 35.2
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 1.6e-06 58.2 86 41.9
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 2.1e-06 57.8 129 33.3
Sp5g12600 Schrenkiella parvula HOM05D009821 ORTHO05D005964 2.1e-06 57.8 126 34.9
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 2.7e-06 57.4 74 43.2
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 2.7e-06 57.4 74 43.2
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 2.7e-06 57.4 74 43.2
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 3.5e-06 57.0 69 44.9
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 4.6e-06 56.6 74 43.2
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 6.0e-06 56.2 61 45.9
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 7.9e-06 55.8 73 49.3
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 7.9e-06 55.8 59 49.2


User provided reference genes

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