Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g13720 Coffea canephora HOM05D001641 ORTHO05D030808 3.4e-27 124.4 70 100.0
Cc00_g25670 Coffea canephora HOM05D001641 ORTHO05D030808 3.4e-27 124.4 70 100.0
Cc06_g01660 Coffea canephora HOM05D001641 ORTHO05D001667 3.6e-16 87.8 51 98.0
Oeu044361.1 Olea europaea HOM05D001641 ORTHO05D001667 4.4e-14 80.9 51 82.4
Oeu004615.1 Olea europaea HOM05D001641 ORTHO05D001667 1.3e-13 79.3 51 80.4
MSTRG.26798 Avicennia marina HOM05D001641 ORTHO05D001667 4.8e-13 77.4 52 90.4
MSTRG.10231 Avicennia marina HOM05D001641 ORTHO05D001667 1.1e-12 76.3 51 80.4
Migut.L01994 Erythranthe guttata HOM05D001641 ORTHO05D001667 1.8e-12 75.5 51 76.5
Oeu028729.2 Olea europaea HOM05D001641 ORTHO05D001667 1.8e-12 75.5 54 75.9
Hma1.2p1_0244F.1_g101220 Hydrangea macrophylla HOM05D001641 ORTHO05D001667 9.1e-12 73.2 51 68.6
SGA_v2.0_scaffold240G44106 Striga asiatica HOM05D001641 ORTHO05D001667 9.1e-12 73.2 53 67.9
unitig_899.g15417 Utricularia gibba HOM05D001641 ORTHO05D001667 2.6e-11 71.6 52 80.8
Migut.J00224 Erythranthe guttata HOM05D001641 ORTHO05D001667 3.5e-11 71.2 53 83.0
Solyc10g085070.3 Solanum lycopersicum HOM05D001641 ORTHO05D001667 3.5e-11 71.2 52 82.7
Sopen10g034530 Solanum pennellii HOM05D001641 ORTHO05D001667 3.5e-11 71.2 52 82.7
PGSC0003DMG400011018 Solanum tuberosum HOM05D001641 ORTHO05D001667 3.5e-11 71.2 52 82.7
SalBow5G3431 Salvia bowleyana HOM05D001641 ORTHO05D001667 4.5e-11 70.9 53 83.0
Oeu015015.2 Olea europaea HOM05D001641 ORTHO05D001667 7.7e-11 70.1 51 76.5
SalBow5G3786 Salvia bowleyana HOM05D001641 ORTHO05D001667 7.7e-11 70.1 55 80.0
Lsat_1_v5_gn_9_36081 Lactuca sativa HOM05D001641 ORTHO05D001667 1.3e-10 69.3 51 66.7
CAN.G355.13 Capsicum annuum HOM05D001641 ORTHO05D001667 1.7e-10 68.9 53 62.3
Nitab4.5_0000008g0730 Nicotiana tabacum HOM05D001641 ORTHO05D001667 1.7e-10 68.9 51 76.5
Nitab4.5_0001837g0010 Nicotiana tabacum HOM05D001641 ORTHO05D001667 1.7e-10 68.9 51 76.5
Actinidia13778 Actinidia chinensis HOM05D001641 ORTHO05D001667 2.2e-10 68.6 53 64.2
MSTRG.5598 Avicennia marina HOM05D001641 ORTHO05D001667 2.2e-10 68.6 52 65.4
CAN.G1297.3 Capsicum annuum HOM05D001641 ORTHO05D001667 2.9e-10 68.2 53 77.4
Solyc09g014160.3 Solanum lycopersicum HOM05D001641 ORTHO05D001667 2.9e-10 68.2 52 63.5
Sopen09g007030 Solanum pennellii HOM05D001641 ORTHO05D001667 2.9e-10 68.2 52 63.5
PGSC0003DMG400020347 Solanum tuberosum HOM05D001641 ORTHO05D001667 2.9e-10 68.2 52 63.5
SGA_v2.0_scaffold106G30523 Striga asiatica HOM05D001641 ORTHO05D001667 2.9e-10 68.2 32 93.8
Dinv35512 Davidia involucrata HOM05D001641 ORTHO05D001667 3.8e-10 67.8 51 64.7
DCAR_015457 Daucus carota HOM05D001641 ORTHO05D001667 5.0e-10 67.4 51 64.7
Hma1.2p1_0763F.1_g214660 Hydrangea macrophylla HOM05D001641 ORTHO05D001667 6.5e-10 67.0 51 64.7
Rhsim05G0206300 Rhododendron simsii HOM05D001641 ORTHO05D001667 6.5e-10 67.0 51 64.7
Actinidia29130 Actinidia chinensis HOM05D001641 ORTHO05D030808 8.5e-10 66.6 32 90.6
Dinv37084 Davidia involucrata HOM05D001641 ORTHO05D001667 8.5e-10 66.6 51 76.5
HanXRQChr10g0286991 Helianthus annuus HOM05D001641 ORTHO05D001667 8.5e-10 66.6 32 90.6
Lsat_1_v5_gn_8_99861 Lactuca sativa HOM05D001641 ORTHO05D001667 8.5e-10 66.6 53 62.3
Peaxi162Scf00141g00081 Petunia axillaris HOM05D001641 ORTHO05D001667 1.1e-09 66.2 55 58.2
HanXRQChr15g0464001 Helianthus annuus HOM05D001641 ORTHO05D001667 1.5e-09 65.9 51 60.8
Lj2C80T3 Lonicera japonica HOM05D001641 ORTHO05D001667 1.5e-09 65.9 49 63.3
ECA236G1576 Erigeron canadensis HOM05D001641 ORTHO05D001667 2.5e-09 65.1 49 75.5
Nitab4.5_0000652g0140 Nicotiana tabacum HOM05D001641 ORTHO05D001667 3.2e-09 64.7 56 75.0
unitig_37.g12667 Utricularia gibba HOM05D001641 ORTHO05D001667 3.2e-09 64.7 51 58.8
ECA247G1117 Erigeron canadensis HOM05D001641 ORTHO05D001667 5.5e-09 63.9 32 87.5
Lj1g0001530 Lotus japonicus HOM05D001641 ORTHO05D001667 7.2e-09 63.5 49 63.3
Peaxi162Scf00009g00195 Petunia axillaris HOM05D001641 ORTHO05D001667 1.6e-08 62.4 30 86.7
THA.LOC104827040 Tarenaya hassleriana HOM05D001641 ORTHO05D001667 1.6e-08 62.4 51 62.7
HanXRQChr08g0220551 Helianthus annuus HOM05D001641 ORTHO05D001667 2.1e-08 62.0 52 59.6
Nitab4.5_0004912g0080 Nicotiana tabacum HOM05D001641 ORTHO05D001667 3.6e-08 61.2 32 81.2
Potri.006G096600 Populus trichocarpa HOM05D001641 ORTHO05D001667 4.7e-08 60.8 49 57.1
Atru.chr8.2199 Acer truncatum HOM05D001641 ORTHO05D001667 6.1e-08 60.5 51 58.8
BcaC09g48052 Brassica carinata HOM05D001641 ORTHO05D001667 6.1e-08 60.5 51 60.8
BolC1t05476H Brassica oleracea HOM05D001641 ORTHO05D001667 6.1e-08 60.5 51 60.8
AUR62041358 Chenopodium quinoa HOM05D001641 ORTHO05D001667 6.1e-08 60.5 51 54.9
Ciclev10011239m.g Citrus clementina HOM05D001641 ORTHO05D001667 6.1e-08 60.5 51 68.6
Sp3g07520 Schrenkiella parvula HOM05D001641 ORTHO05D001667 1.4e-07 59.3 51 54.9
AL3G20130 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 1.8e-07 58.9 32 78.1
AL3G20140 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 1.8e-07 58.9 32 78.1
CARHR083430 Cardamine hirsuta HOM05D001641 ORTHO05D001667 1.8e-07 58.9 32 78.1
Sabra06G0074200 Salix brachista HOM05D001641 ORTHO05D001667 1.8e-07 58.9 49 73.5
SGA_v2.0_scaffold85G26763 Striga asiatica HOM05D001641 ORTHO05D001667 1.8e-07 58.9 52 59.6
BcaB04g18549 Brassica carinata HOM05D001641 ORTHO05D001667 2.3e-07 58.5 54 55.6
BcaC01g04213 Brassica carinata HOM05D001641 ORTHO05D001667 2.3e-07 58.5 54 55.6
A03p36150 Brassica napus HOM05D001641 ORTHO05D001667 2.3e-07 58.5 54 55.6
C03p43810 Brassica napus HOM05D001641 ORTHO05D001667 2.3e-07 58.5 54 55.6
BolC3t16649H Brassica oleracea HOM05D001641 ORTHO05D001667 2.3e-07 58.5 54 55.6
BraA03t12786Z Brassica rapa HOM05D001641 ORTHO05D001667 2.3e-07 58.5 54 55.6
Aa31LG3G1600 Aethionema arabicum HOM05D001641 ORTHO05D001667 3.0e-07 58.2 32 78.1
arahy.Tifrunner.gnm1.ann1.JIF81Q Arachis hypogaea HOM05D001641 ORTHO05D001667 3.0e-07 58.2 30 83.3
arahy.Tifrunner.gnm1.ann1.UC3VQR Arachis hypogaea HOM05D001641 ORTHO05D001667 3.0e-07 58.2 30 83.3
Thhalv10020222m.g Eutrema salsugineum HOM05D001641 ORTHO05D001667 3.0e-07 58.2 58 58.6
Glyma.07G144900 Glycine max HOM05D001641 ORTHO05D001667 3.0e-07 58.2 54 68.5
Carub.0003s0823 Capsella rubella HOM05D001641 ORTHO05D001667 4.0e-07 57.8 32 75.0
Cfa017255 Carpinus fangiana HOM05D001641 ORTHO05D001667 4.0e-07 57.8 47 57.4
Sabra16G0107700 Salix brachista HOM05D001641 ORTHO05D001667 4.0e-07 57.8 49 55.1
Duzib128G0887 Durio zibethinus HOM05D001641 ORTHO05D001667 6.7e-07 57.0 51 54.9
Manes.08G087800 Manihot esculenta HOM05D001641 ORTHO05D001667 6.7e-07 57.0 51 62.7
Potri.016G111400 Populus trichocarpa HOM05D001641 ORTHO05D001667 6.7e-07 57.0 49 63.3
BraA01t04318Z Brassica rapa HOM05D001641 ORTHO05D001667 8.8e-07 56.6 51 56.9
AUR62025773 Chenopodium quinoa HOM05D001641 ORTHO05D001667 8.8e-07 56.6 30 80.0
Prupe.6G270900 Prunus persica HOM05D001641 ORTHO05D001667 8.8e-07 56.6 55 63.6
unitig_46.g18408 Utricularia gibba HOM05D001641 ORTHO05D001667 8.8e-07 56.6 51 54.9
FvH4_6g12000 Fragaria vesca HOM05D001641 ORTHO05D001667 1.2e-06 56.2 51 54.9
FAN02G3953 Fragaria x ananassa HOM05D001641 ORTHO05D001667 1.2e-06 56.2 51 54.9
FAN05G0357 Fragaria x ananassa HOM05D001641 ORTHO05D001667 1.2e-06 56.2 51 54.9
FAN09G4135 Fragaria x ananassa HOM05D001641 ORTHO05D001667 1.2e-06 56.2 51 54.9
FAN14G1423 Fragaria x ananassa HOM05D001641 ORTHO05D001667 1.2e-06 56.2 51 54.9
FAN14G4770 Fragaria x ananassa HOM05D001641 ORTHO05D001667 1.2e-06 56.2 51 54.9
Gorai.007G378100 Gossypium raimondii HOM05D001641 ORTHO05D001667 1.2e-06 56.2 55 50.9
Phvul.008G107800 Phaseolus vulgaris HOM05D001641 ORTHO05D001667 1.2e-06 56.2 30 80.0
Sed0017639 Sechium edule HOM05D001641 ORTHO05D001667 1.2e-06 56.2 32 75.0
Sc01g0006830 Simmondsia chinensis HOM05D001641 ORTHO05D001667 1.2e-06 56.2 31 77.4
TWI77G0066 Tripterygium wilfordii HOM05D001641 ORTHO05D001667 1.2e-06 56.2 32 75.0
VMungo1383G3096 Vigna mungo HOM05D001641 ORTHO05D001667 1.2e-06 56.2 30 80.0
AT3G09070 Arabidopsis thaliana HOM05D001641 ORTHO05D001667 1.5e-06 55.8 32 71.9
CANSAT35G1325 Cannabis sativa HOM05D001641 ORTHO05D001667 1.5e-06 55.8 51 70.6
Gohir.A11G328700 Gossypium hirsutum HOM05D001641 ORTHO05D001667 1.5e-06 55.8 32 75.0
BcaC02g12919 Brassica carinata HOM05D001641 ORTHO05D001667 2.0e-06 55.5 50 56.0
BcaC02g12922 Brassica carinata HOM05D001641 ORTHO05D001667 2.0e-06 55.5 50 56.0
A04p29180 Brassica napus HOM05D001641 ORTHO05D001667 2.0e-06 55.5 50 56.0
C04p66390 Brassica napus HOM05D001641 ORTHO05D001667 2.0e-06 55.5 50 56.0
BolC4t28144H Brassica oleracea HOM05D001641 ORTHO05D001667 2.0e-06 55.5 50 56.0
BraA04t18387Z Brassica rapa HOM05D001641 ORTHO05D001667 2.0e-06 55.5 50 56.0
Cpa.g.sc163.1 Carica papaya HOM05D001641 ORTHO05D001667 2.0e-06 55.5 32 71.9
ClCG04G007240 Citrullus lanatus HOM05D001641 ORTHO05D001667 2.6e-06 55.1 32 71.9
MELO3C003225.2 Cucumis melo HOM05D001641 ORTHO05D001667 2.6e-06 55.1 32 71.9
CsaV3_4G026000 Cucumis sativus L. HOM05D001641 ORTHO05D001667 2.6e-06 55.1 32 71.9
TWI53G0423 Tripterygium wilfordii HOM05D001641 ORTHO05D001667 2.6e-06 55.1 32 75.0
COL.COLO4_14595 Corchorus olitorius HOM05D001641 ORTHO05D001667 3.3e-06 54.7 32 71.9
Duzib106G0289 Durio zibethinus HOM05D001641 ORTHO05D001667 3.3e-06 54.7 50 54.0
Manes.09G102200 Manihot esculenta HOM05D001641 ORTHO05D001667 3.3e-06 54.7 51 60.8
Thecc.05G021900 Theobroma cacao HOM05D001641 ORTHO05D001667 3.3e-06 54.7 32 71.9
CiPaw.09G206200 Carya illinoinensis HOM05D001641 ORTHO05D001667 4.4e-06 54.3 30 76.7
MD12G1160400 Malus domestica HOM05D001641 ORTHO05D001667 4.4e-06 54.3 32 71.9
RcHm_v2.0_Chr3g0463831 Rosa chinensis HOM05D001641 ORTHO05D001667 5.7e-06 53.9 45 53.3
Haze_20951 Corylus avellana HOM05D001641 ORTHO05D001667 7.5e-06 53.5 28 78.6
Haze_20953 Corylus avellana HOM05D001641 ORTHO05D001667 7.5e-06 53.5 28 78.6
SGA_v2.0_scaffold75G24999 Striga asiatica HOM05D001641 ORTHO05D001667 7.5e-06 53.5 50 54.0
PGR031G0169 Punica granatum HOM05D001641 ORTHO05D001667 9.7e-06 53.1 53 62.3
TWI74G0768 Tripterygium wilfordii HOM05D001641 ORTHO05D001667 9.7e-06 53.1 32 71.9


User provided reference genes

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