Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 1.0e-98 363.6 207 100.0
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 2.8e-77 292.4 207 79.7
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 5.3e-76 288.1 207 71.0
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 2.6e-75 285.8 212 79.7
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 3.4e-75 285.4 206 75.2
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 3.4e-75 285.4 205 73.7
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 7.7e-75 284.3 205 79.5
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 7.7e-75 284.3 196 81.1
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 1.0e-74 283.9 205 77.6
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 1.3e-74 283.5 205 75.1
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 1.7e-74 283.1 192 87.0
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 8.5e-74 280.8 207 77.3
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 1.1e-73 280.4 205 78.0
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 1.4e-73 280.0 207 73.4
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 1.4e-73 280.0 201 70.6
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.9e-73 279.6 197 71.1
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 2.5e-73 279.3 203 70.0
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 2.5e-73 279.3 208 70.7
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.2e-73 278.9 186 73.7
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 4.2e-73 278.5 198 72.2
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 4.2e-73 278.5 205 68.3
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 5.5e-73 278.1 198 76.3
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 5.5e-73 278.1 207 71.5
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 9.4e-73 277.3 205 68.3
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 2.1e-72 276.2 208 80.8
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 2.7e-72 275.8 200 82.5
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 3.6e-72 275.4 206 70.4
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 4.7e-72 275.0 205 72.7
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 6.1e-72 274.6 202 73.8
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 8.0e-72 274.2 208 68.3
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 8.0e-72 274.2 198 75.3
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 1.4e-71 273.5 205 68.3
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 1.4e-71 273.5 202 82.2
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 1.8e-71 273.1 206 68.4
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 1.8e-71 273.1 203 82.8
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 2.3e-71 272.7 206 70.4
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.3e-71 272.7 206 68.9
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 3.0e-71 272.3 205 72.7
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 3.0e-71 272.3 207 78.3
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 6.7e-71 271.2 206 71.8
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 8.8e-71 270.8 219 65.8
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 8.8e-71 270.8 205 70.7
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.5e-70 270.0 205 76.6
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 1.5e-70 270.0 204 79.9
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 2.6e-70 269.2 203 67.0
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 4.4e-70 268.5 205 73.7
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 4.4e-70 268.5 207 75.8
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 5.7e-70 268.1 203 71.4
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 7.4e-70 267.7 205 77.6
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 7.4e-70 267.7 207 65.7
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 1.7e-69 266.5 207 74.9
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 1.7e-69 266.5 206 67.5
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 2.2e-69 266.2 207 66.7
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 2.2e-69 266.2 209 75.1
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 2.8e-69 265.8 189 81.0
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 3.7e-69 265.4 204 67.6
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 4.8e-69 265.0 206 71.8
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 4.8e-69 265.0 206 71.8
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 4.8e-69 265.0 212 67.0
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 6.3e-69 264.6 207 74.9
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 8.2e-69 264.2 205 79.0
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 8.2e-69 264.2 205 66.8
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 8.2e-69 264.2 207 77.8
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 1.4e-68 263.5 207 67.1
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 1.4e-68 263.5 207 66.2
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 1.8e-68 263.1 206 72.3
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 1.8e-68 263.1 207 68.1
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 2.4e-68 262.7 207 72.9
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 4.1e-68 261.9 212 66.5
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 7.0e-68 261.2 204 68.1
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 1.6e-67 260.0 188 77.7
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 2.0e-67 259.6 202 66.3
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 2.6e-67 259.2 206 72.3
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 5.9e-67 258.1 207 70.0
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 5.9e-67 258.1 207 74.9
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 5.9e-67 258.1 200 79.5
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 1.0e-66 257.3 203 67.0
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 1.3e-66 256.9 206 78.2
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 1.7e-66 256.5 196 81.6
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 2.2e-66 256.1 206 74.8
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 2.9e-66 255.8 205 71.7
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 3.8e-66 255.4 207 78.3
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 3.8e-66 255.4 214 72.0
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 1.1e-65 253.8 204 70.6
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 1.1e-65 253.8 212 63.7
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 1.5e-65 253.4 207 77.8
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 2.5e-65 252.7 206 74.3
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 2.5e-65 252.7 185 81.6
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 3.2e-65 252.3 207 70.5
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 5.5e-65 251.5 199 67.8
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 5.5e-65 251.5 204 76.0
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 2.1e-64 249.6 206 74.3
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 3.6e-64 248.8 205 67.3
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 8.0e-64 247.7 201 69.7
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 8.8e-63 244.2 202 76.7
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 2.6e-62 242.7 186 78.0
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 1.3e-61 240.4 206 72.8
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 2.7e-59 232.6 136 80.9
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.7e-59 232.6 136 80.9
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 5.9e-59 231.5 207 67.6
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 1.7e-58 229.9 198 72.7
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.9e-58 229.2 136 80.1
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.2e-57 225.3 133 80.5
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 2.1e-56 223.0 125 80.8
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 6.1e-56 221.5 154 76.6
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 8.0e-56 221.1 141 74.5
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 1.0e-55 220.7 185 62.7
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 5.2e-55 218.4 203 68.5
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 6.8e-55 218.0 126 81.0
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 1.5e-54 216.9 197 72.6
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 1.3e-53 213.8 129 77.5
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 6.3e-53 211.5 205 57.1
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 6.3e-53 211.5 127 78.7
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 2.4e-52 209.5 159 83.0
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 1.1e-49 200.7 116 79.3
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 8.0e-48 194.5 157 63.7
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 3.0e-47 192.6 108 86.1
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 7.0e-44 181.4 101 85.1
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 2.7e-43 179.5 90 92.2
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 3.2e-36 156.0 206 54.9
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 1.0e-34 151.0 121 82.6
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 9.5e-33 144.4 82 80.5
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 1.3e-29 134.0 121 58.7
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 7.0e-28 128.3 205 54.1
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 2.7e-27 126.3 101 54.5
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 2.3e-23 113.2 59 86.4
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 1.5e-22 110.5 93 53.8
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 2.9e-21 106.3 105 49.5
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-16 90.9 83 55.4
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.0e-15 85.9 46 82.6
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 6.4e-13 78.6 127 35.4
Solyc03g094070.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 1.6e-11 73.9 86 47.7
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 3.5e-11 72.8 36 88.9
PGSC0003DMG401008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 1.1e-09 67.8 84 75.0


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