Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 1.8e-276 955.3 482 100.0
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 1.1e-143 514.2 477 57.7
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 2.4e-135 486.5 512 54.9
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 4.0e-135 485.7 481 55.3
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 3.4e-134 482.6 480 55.4
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 1.0e-133 481.1 492 54.7
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 2.9e-133 479.6 491 53.6
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 1.2e-131 474.2 487 54.2
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 7.4e-129 464.9 472 54.0
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 1.3e-128 464.2 476 52.9
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 4.8e-128 462.2 472 54.7
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 2.4e-127 459.9 416 58.2
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 5.3e-127 458.8 473 54.5
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 1.2e-126 457.6 482 52.5
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 2.6e-126 456.4 488 54.3
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 3.8e-125 452.6 518 50.2
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 5.0e-125 452.2 521 48.2
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 4.2e-124 449.1 522 48.9
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 7.2e-124 448.4 480 53.3
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 7.9e-123 444.9 524 49.6
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 7.9e-123 444.9 509 49.3
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.0e-122 444.5 471 52.9
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 3.0e-122 443.0 496 51.4
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 3.9e-122 442.6 509 49.9
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 6.7e-122 441.8 518 48.5
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 4.3e-121 439.1 470 51.1
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 5.7e-121 438.7 479 51.6
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 5.7e-121 438.7 520 49.4
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 7.4e-121 438.3 482 51.7
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 1.3e-120 437.6 509 49.1
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.7e-120 437.2 491 52.3
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 2.2e-120 436.8 472 53.0
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 4.8e-120 435.6 475 50.7
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 8.2e-120 434.9 471 52.4
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.1e-119 434.5 468 51.9
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 2.4e-119 433.3 488 51.0
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.1e-119 433.0 472 52.5
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 4.1e-119 432.6 475 50.9
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 2.6e-118 429.9 484 51.2
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 3.4e-118 429.5 476 51.7
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 7.7e-118 428.3 472 52.3
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.7e-117 427.2 469 51.6
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 2.2e-117 426.8 472 52.3
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.9e-117 426.4 489 50.3
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.9e-117 426.4 469 51.6
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 3.8e-117 426.0 492 50.8
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 3.8e-117 426.0 471 51.0
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 3.8e-117 426.0 498 48.2
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 6.5e-117 425.2 469 52.0
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 8.5e-117 424.9 505 48.7
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 1.4e-116 424.1 483 48.7
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 1.4e-116 424.1 471 52.2
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 1.9e-116 423.7 483 48.9
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 4.2e-116 422.5 480 50.4
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 7.2e-116 421.8 479 50.5
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 1.2e-115 421.0 476 49.8
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 7.9e-115 418.3 467 50.3
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 3.0e-114 416.4 476 49.8
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 2.0e-113 413.7 505 48.1
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 3.3e-113 412.9 472 51.7
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 9.1e-111 404.8 426 51.4
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 2.9e-109 399.8 472 50.4
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 6.5e-109 398.7 476 48.1
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 8.0e-107 391.7 545 46.6
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 6.7e-106 388.7 471 49.7
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 3.3e-105 386.3 494 46.2
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 5.7e-105 385.6 484 45.9
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 8.2e-104 381.7 478 46.7
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.4e-103 380.9 416 48.8
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 3.5e-102 376.3 483 47.2
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 8.5e-101 371.7 479 47.0
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 5.5e-100 369.0 486 46.1
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 7.2e-100 368.6 480 46.5
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 7.2e-100 368.6 483 45.8
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 4.7e-99 365.9 487 46.4
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 1.0e-98 364.8 475 46.7
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 2.3e-98 363.6 479 46.1
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 6.8e-98 362.1 481 45.3
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 1.1e-95 354.8 479 45.7
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 1.8e-95 354.0 479 45.7
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 3.8e-93 346.3 471 45.9
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 5.0e-93 345.9 481 44.5
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.9e-92 344.0 479 44.5
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 5.5e-92 342.4 475 45.3
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 1.5e-89 334.3 472 43.6
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 2.5e-84 317.0 348 52.6
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 5.5e-84 315.8 386 48.2
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 3.0e-82 310.1 409 45.2
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 2.8e-80 303.5 402 45.8
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 6.3e-80 302.4 493 41.6
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 2.7e-78 297.0 412 46.1
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 7.5e-73 278.9 469 38.2
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.3e-69 268.1 473 39.3
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.3e-69 267.3 348 47.1
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 5.0e-69 266.2 175 72.6
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 6.0e-62 242.7 208 62.0
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 2.3e-61 240.7 203 62.6
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 1.9e-60 237.7 225 57.3
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 9.5e-60 235.3 328 41.8
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.0e-53 215.3 531 30.7
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 3.9e-53 213.4 546 29.7
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 5.6e-52 209.5 285 43.2
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 1.0e-45 188.7 123 74.8
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.0e-45 188.7 515 28.2
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.3e-45 188.3 123 74.8
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.7e-45 188.0 416 32.2
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.9e-45 186.8 272 40.1
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 1.3e-43 181.8 248 44.8
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 7.1e-39 166.0 217 46.1
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 1.4e-34 151.8 176 43.2
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 2.0e-25 121.3 70 80.0
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 7.6e-25 119.4 110 57.3
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 1.3e-24 118.6 72 76.4
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 6.0e-22 109.8 89 64.0
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 9.3e-15 85.9 48 83.3
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 8.7e-13 79.3 55 69.1
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 3.7e-11 73.9 133 33.8
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 3.7e-11 73.9 82 53.7
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 5.0e-08 63.5 51 58.8
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 5.5e-07 60.1 93 44.1
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 7.9e-06 56.2 210 29.0


User provided reference genes

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