Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 2.5e-98 362.1 181 100.0
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 5.9e-55 218.0 196 57.7
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 7.7e-55 217.6 187 58.8
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 2.9e-54 215.7 186 60.2
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 1.9e-53 213.0 192 59.4
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 4.2e-53 211.8 148 68.2
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 5.5e-53 211.5 187 55.6
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 9.4e-53 210.7 180 61.1
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 1.2e-52 210.3 185 58.9
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 1.2e-52 210.3 183 59.0
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 2.1e-52 209.5 156 66.7
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 2.7e-52 209.1 191 58.1
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 2.7e-52 209.1 187 56.7
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 8.0e-52 207.6 186 59.1
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 8.0e-52 207.6 183 57.9
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 1.0e-51 207.2 180 60.6
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 7.5e-50 201.1 181 57.5
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 1.7e-49 199.9 195 54.4
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 1.7e-49 199.9 182 56.6
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 3.7e-49 198.7 190 56.3
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 1.8e-48 196.4 185 54.6
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 1.8e-48 196.4 151 62.3
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 2.4e-48 196.1 180 60.6
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 3.1e-48 195.7 181 54.7
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 3.1e-48 195.7 180 57.8
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 4.1e-48 195.3 183 54.6
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 4.1e-48 195.3 180 57.2
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 4.1e-48 195.3 188 55.9
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 7.0e-48 194.5 190 54.2
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 1.2e-47 193.7 185 54.6
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 1.6e-47 193.4 183 55.2
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 2.7e-47 192.6 180 55.0
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 7.7e-47 191.0 180 54.4
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 1.0e-46 190.7 185 53.5
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 1.3e-46 190.3 186 54.3
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 1.7e-46 189.9 202 49.5
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 2.9e-46 189.1 191 51.3
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 3.8e-46 188.7 159 59.7
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.5e-45 186.0 179 54.2
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 9.5e-45 184.1 176 54.0
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 1.2e-44 183.7 179 54.2
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.6e-44 183.3 183 53.0
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 1.6e-44 183.3 181 49.2
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 4.7e-44 181.8 188 53.7
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 4.7e-44 181.8 179 52.0
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 1.0e-43 180.6 186 50.0
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 1.0e-43 180.6 179 53.1
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 1.8e-43 179.9 183 50.3
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 2.3e-43 179.5 179 52.0
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 3.0e-43 179.1 180 51.1
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 5.2e-43 178.3 188 53.2
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 6.8e-43 177.9 179 51.4
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 8.9e-43 177.6 188 52.7
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 2.0e-42 176.4 114 74.6
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 9.8e-42 174.1 183 50.8
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 2.2e-41 172.9 114 72.8
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 2.8e-41 172.6 183 48.6
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 2.8e-41 172.6 188 50.5
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 3.7e-41 172.2 187 49.7
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.4e-40 170.2 183 51.4
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 1.4e-40 170.2 183 49.2
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 3.9e-38 162.2 143 58.7
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 4.0e-35 152.1 114 67.5
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 1.2e-26 124.0 113 52.2
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 4.4e-26 122.1 171 42.1
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.6e-23 113.6 110 50.0
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 4.6e-23 112.1 96 58.3
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 6.6e-22 108.2 180 34.4
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 8.6e-22 107.8 115 49.6
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 4.3e-21 105.5 105 46.7
arahy.Tifrunner.gnm1.ann1.TSAG7F Arachis hypogaea HOM05D004830 ORTHO05D005310 2.0e-18 96.7 214 29.0
Dinv14555 Davidia involucrata HOM05D004830 ORTHO05D005310 2.0e-18 96.7 111 41.4
GSVIVG01029897001 Vitis vinifera HOM05D004830 ORTHO05D005310 2.6e-18 96.3 111 41.4
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 4.4e-18 95.5 111 42.3
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 7.5e-18 94.7 111 41.4
PSO591G0293 Papaver somniferum HOM05D004830 ORTHO05D005310 7.5e-18 94.7 111 44.1
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 1.3e-17 94.0 171 32.2
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 1.7e-17 93.6 111 41.4
Aqoxy2G00040 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 2.9e-17 92.8 124 38.7
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 2.9e-17 92.8 219 28.8
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 2.9e-17 92.8 111 41.4
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.7e-17 92.4 111 40.5
MBI19_g09302_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.7e-17 92.4 102 40.2
MBI19_g15087_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.7e-17 92.4 102 40.2
PSO832G0423 Papaver somniferum HOM05D004830 ORTHO05D005310 4.9e-17 92.0 111 42.3
Cpa.g.sc73.42 Carica papaya HOM05D004830 ORTHO05D005310 8.3e-17 91.3 111 39.6
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 8.3e-17 91.3 225 26.7
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 8.3e-17 91.3 225 26.7
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 8.3e-17 91.3 99 42.4
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 1.4e-16 90.5 111 38.7
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.4e-16 89.7 98 41.8
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 2.4e-16 89.7 98 41.8
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 3.2e-16 89.4 121 36.4
FAN28G2201 Fragaria x ananassa HOM05D004830 ORTHO05D005310 5.4e-16 88.6 114 38.6
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 7.1e-16 88.2 231 26.8
Migut.J01591 Erythranthe guttata HOM05D004830 ORTHO05D005310 7.1e-16 88.2 116 37.9
FAN26G1469 Fragaria x ananassa HOM05D004830 ORTHO05D005310 7.1e-16 88.2 114 38.6
TPR.G26134 Trifolium pratense HOM05D004830 ORTHO05D005310 7.1e-16 88.2 56 73.2
MSTRG.6264 Avicennia marina HOM05D004830 ORTHO05D005310 1.6e-15 87.0 108 41.7
Ciclev10032343m.g Citrus clementina HOM05D004830 ORTHO05D005310 1.6e-15 87.0 112 38.4
Psat3g084280 Pisum sativum HOM05D004830 ORTHO05D005310 1.6e-15 87.0 108 39.8
Lj1g0023159 Lotus japonicus HOM05D004830 ORTHO05D005310 2.7e-15 86.3 118 39.8
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 3.5e-15 85.9 98 41.8
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 4.6e-15 85.5 98 41.8
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 7.8e-15 84.7 111 36.9
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 1.7e-14 83.6 98 39.8
TPR.G26160 Trifolium pratense HOM05D004830 ORTHO05D005310 2.3e-14 83.2 141 40.4
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 2.5e-13 79.7 100 38.0
Zm00001eb036570 Zea mays HOM05D004830 ORTHO05D005310 3.3e-13 79.3 154 37.0
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 4.3e-13 79.0 102 39.2
PGR042G2697 Punica granatum HOM05D004830 ORTHO05D005310 5.6e-13 78.6 111 36.0
TPR.G23653 Trifolium pratense HOM05D004830 ORTHO05D005310 5.6e-13 78.6 99 38.4
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 9.6e-13 77.8 95 40.0
Gohir.D03G114700 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.2e-12 77.4 107 42.1
Prupe.7G025800 Prunus persica HOM05D004830 ORTHO05D005310 2.1e-12 76.6 100 38.0
Eucgr.A02163 Eucalyptus grandis HOM05D004830 ORTHO05D005310 4.7e-12 75.5 97 37.1
Gohir.D08G162001 Gossypium hirsutum HOM05D004830 ORTHO05D005310 4.7e-12 75.5 51 66.7
RhsimUnG0023100 Rhododendron simsii HOM05D004830 ORTHO05D005310 6.8e-11 71.6 136 30.9
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 1.7e-09 67.0 99 36.4
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 2.2e-09 66.6 104 35.6
VMungo1383G2348 Vigna mungo HOM05D004830 ORTHO05D005310 1.1e-08 64.3 103 35.0
AagrBONN_evm.TU.Sc2ySwM_344.609 Anthoceros agrestis HOM05D004830 ORTHO05D005310 9.3e-08 61.2 111 31.5


User provided reference genes

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