Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.3e-58 229.6 119 100.0
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 3.3e-38 161.8 119 70.6
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.3e-37 159.8 120 73.3
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 3.7e-37 158.3 121 73.6
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 4.8e-37 157.9 120 72.5
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 6.2e-37 157.5 120 73.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.8e-36 156.0 119 69.7
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 3.4e-35 151.8 118 66.9
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 7.6e-35 150.6 125 66.4
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 1.7e-34 149.4 124 66.9
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.7e-34 149.4 122 67.2
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 2.2e-34 149.1 127 66.1
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 2.9e-34 148.7 114 67.5
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.9e-34 148.7 125 65.6
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.9e-34 148.7 125 65.6
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.9e-34 148.7 125 65.6
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.9e-34 148.7 125 65.6
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.9e-34 148.7 120 68.3
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 2.9e-34 148.7 120 68.3
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 4.9e-34 147.9 125 67.2
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.9e-34 147.9 120 68.3
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 8.4e-34 147.1 120 66.7
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.1e-33 146.7 125 62.4
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.9e-33 146.0 120 69.2
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.9e-33 146.0 120 67.5
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 2.5e-33 145.6 119 67.2
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.5e-33 145.6 126 63.5
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 3.2e-33 145.2 120 66.7
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 5.5e-33 144.4 120 65.8
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 5.5e-33 144.4 117 67.5
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 7.1e-33 144.1 120 67.5
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 7.1e-33 144.1 121 66.9
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.6e-32 142.9 121 63.6
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 2.1e-32 142.5 121 66.1
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 2.1e-32 142.5 119 63.9
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 3.5e-32 141.7 120 68.3
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 3.5e-32 141.7 116 66.4
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 4.6e-32 141.4 117 65.8
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 6.0e-32 141.0 121 63.6
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 6.0e-32 141.0 119 64.7
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 6.0e-32 141.0 122 63.1
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 7.9e-32 140.6 119 64.7
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.0e-31 140.2 123 65.0
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.0e-31 140.2 130 64.6
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.0e-31 140.2 120 67.5
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.0e-31 140.2 99 72.7
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.3e-31 139.8 122 67.2
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.3e-31 139.0 83 78.3
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 2.3e-31 139.0 121 64.5
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 3.9e-31 138.3 126 63.5
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 5.1e-31 137.9 126 61.1
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 5.1e-31 137.9 130 62.3
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 6.7e-31 137.5 124 62.9
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 8.7e-31 137.1 126 63.5
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 1.1e-30 136.7 118 63.6
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.5e-30 136.3 129 62.8
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.5e-30 136.3 99 71.7
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.3e-30 134.8 78 84.6
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.3e-30 134.8 78 84.6
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 5.7e-30 134.4 123 59.3
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.3e-29 133.3 126 61.1
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.6e-29 132.9 130 60.8
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.6e-29 132.9 130 60.8
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.6e-29 132.9 131 61.1
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 2.1e-29 132.5 126 61.9
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 2.1e-29 132.5 124 62.1
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 4.8e-29 131.3 122 61.5
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 6.2e-29 131.0 130 60.0
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 6.2e-29 131.0 67 91.0
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.4e-28 129.8 101 69.3
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.8e-28 129.4 126 60.3
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 2.4e-28 129.0 98 68.4
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 4.1e-28 128.3 117 59.8
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 4.1e-28 128.3 124 63.7
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 4.1e-28 128.3 118 61.9
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 5.3e-28 127.9 82 80.5
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 6.9e-28 127.5 125 59.2
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 6.9e-28 127.5 73 83.6
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.2e-27 126.7 108 64.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.2e-27 126.7 118 61.9
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 4.5e-27 124.8 74 82.4
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 5.8e-27 124.4 117 62.4
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 5.8e-27 124.4 120 57.5
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 1.7e-26 122.9 68 83.8
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 6.5e-26 120.9 162 45.7
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 1.1e-25 120.2 124 58.1
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 1.2e-24 116.7 120 57.5
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 2.7e-24 115.5 72 75.0
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 3.9e-23 111.7 121 56.2
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 3.3e-22 108.6 80 70.0
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.3e-21 104.4 71 66.2
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.4e-20 103.2 70 68.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 4.1e-20 101.7 48 95.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.2e-19 100.1 48 95.8
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 1.6e-16 89.7 58 72.4
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 3.3e-14 82.0 134 38.8
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.2e-13 79.3 84 48.8
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.2e-08 63.5 76 44.7
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 3.9e-07 58.5 74 54.1


User provided reference genes

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