Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g10850 Coffea canephora HOM05D000431 ORTHO05D000364 1.6e-25 118.6 58 100.0
Cc00_g19320 Coffea canephora HOM05D000431 ORTHO05D000364 2.0e-17 91.7 58 77.6
MELO3C003286.2 Cucumis melo HOM05D000431 ORTHO05D000364 1.2e-12 75.9 64 62.5
QL10p038811 Quercus lobata HOM05D000431 ORTHO05D000364 9.8e-12 72.8 64 59.4
ClCG04G002630 Citrullus lanatus HOM05D000431 ORTHO05D000364 1.3e-11 72.4 66 56.1
Dinv11228 Davidia involucrata HOM05D000431 ORTHO05D000364 1.3e-11 72.4 62 59.7
Glyma.06G160100 Glycine max HOM05D000431 ORTHO05D000364 1.1e-10 69.3 58 60.3
Medtr3g097320 Medicago truncatula HOM05D000431 ORTHO05D000364 1.4e-10 68.9 67 55.2
Medtr2g006330 Medicago truncatula HOM05D000431 ORTHO05D000364 1.9e-10 68.6 60 60.0
GSVIVG01022427001 Vitis vinifera HOM05D000431 ORTHO05D000364 1.9e-10 68.6 64 59.4
CsaV3_4G030050 Cucumis sativus L. HOM05D000431 ORTHO05D000364 9.2e-10 66.2 64 56.2
Oeu050085.1 Olea europaea HOM05D000431 ORTHO05D000364 1.2e-09 65.9 60 55.0
Psat5g057480 Pisum sativum HOM05D000431 ORTHO05D000364 3.5e-09 64.3 63 52.4
Ciclev10025965m.g Citrus clementina HOM05D000431 ORTHO05D000364 6.0e-09 63.5 62 50.0
RcHm_v2.0_Chr7g0221191 Rosa chinensis HOM05D000431 ORTHO05D000364 7.8e-09 63.2 59 57.6
Sed0020684 Sechium edule HOM05D000431 ORTHO05D000364 1.0e-08 62.8 58 53.4
FAN04G0787 Fragaria x ananassa HOM05D000431 ORTHO05D000364 1.3e-08 62.4 59 57.6
Oeu017625.1 Olea europaea HOM05D000431 ORTHO05D000364 1.3e-08 62.4 47 66.0
Haze_25425 Corylus avellana HOM05D000431 ORTHO05D000364 1.7e-08 62.0 64 54.7
Peaxi162Scf00525g00614 Petunia axillaris HOM05D000431 ORTHO05D000364 2.3e-08 61.6 62 53.2
TPR.G28701 Trifolium pratense HOM05D000431 ORTHO05D000364 2.3e-08 61.6 65 53.8
Prupe.1G573300 Prunus persica HOM05D000431 ORTHO05D000364 3.0e-08 61.2 59 55.9
Cpa.g.sc138.19 Carica papaya HOM05D000431 ORTHO05D000364 3.9e-08 60.8 67 52.2
Nitab4.5_0000905g0170 Nicotiana tabacum HOM05D000431 ORTHO05D000364 3.9e-08 60.8 64 51.6
CAN.G1464.9 Capsicum annuum HOM05D000431 ORTHO05D000364 6.6e-08 60.1 62 51.6
Lalb_Chr20g0123611 Lupinus albus HOM05D000431 ORTHO05D000364 8.6e-08 59.7 60 55.0
Sc09g0004300 Simmondsia chinensis HOM05D000431 ORTHO05D000364 8.6e-08 59.7 59 52.5
Solyc05g056550.3 Solanum lycopersicum HOM05D000431 ORTHO05D000364 1.1e-07 59.3 59 52.5
Phvul.009G157800 Phaseolus vulgaris HOM05D000431 ORTHO05D000364 1.5e-07 58.9 60 53.3
Sabra03G0008500 Salix brachista HOM05D000431 ORTHO05D000364 1.9e-07 58.5 66 48.5
MSTRG.2764 Avicennia marina HOM05D000431 ORTHO05D000364 2.5e-07 58.2 58 51.7
CiPaw.04G178600 Carya illinoinensis HOM05D000431 ORTHO05D000364 2.5e-07 58.2 71 47.9
Glyma.04G205400 Glycine max HOM05D000431 ORTHO05D000364 2.5e-07 58.2 58 53.4
Nitab4.5_0006481g0010 Nicotiana tabacum HOM05D000431 ORTHO05D000364 2.5e-07 58.2 65 49.2
Atru.chr4.1150 Acer truncatum HOM05D000431 ORTHO05D000364 3.3e-07 57.8 66 48.5
ClCG04G002510 Citrullus lanatus HOM05D000431 ORTHO05D000364 3.3e-07 57.8 65 46.2
Potri.004G138300 Populus trichocarpa HOM05D000431 ORTHO05D000364 3.3e-07 57.8 68 50.0
ATR0584G265 Amborella trichopoda HOM05D000431 ORTHO05D000364 4.3e-07 57.4 63 47.6
arahy.Tifrunner.gnm1.ann1.IF0A72 Arachis hypogaea HOM05D000431 ORTHO05D000364 4.3e-07 57.4 61 50.8
Lalb_Chr07g0184011 Lupinus albus HOM05D000431 ORTHO05D000364 4.3e-07 57.4 59 52.5
arahy.Tifrunner.gnm1.ann1.663I25 Arachis hypogaea HOM05D000431 ORTHO05D000364 5.6e-07 57.0 62 50.0
Glyma.12G169800 Glycine max HOM05D000431 ORTHO05D000364 5.6e-07 57.0 68 45.6
PGSC0003DMG400023441 Solanum tuberosum HOM05D000431 ORTHO05D000364 5.6e-07 57.0 70 48.6
MD15G1428500 Malus domestica HOM05D000431 ORTHO05D000364 7.3e-07 56.6 61 49.2
SGA_v2.0_scaffold211G42134 Striga asiatica HOM05D000431 ORTHO05D000364 7.3e-07 56.6 58 51.7
TWI79G0846 Tripterygium wilfordii HOM05D000431 ORTHO05D000364 7.3e-07 56.6 65 47.7
Potri.003G015400 Populus trichocarpa HOM05D000431 ORTHO05D000364 9.5e-07 56.2 66 51.5
PGR102G0814 Punica granatum HOM05D000431 ORTHO05D000364 9.5e-07 56.2 71 47.9
Sopen05g034950 Solanum pennellii HOM05D000431 ORTHO05D000364 9.5e-07 56.2 58 51.7
CsaV3_4G030260 Cucumis sativus L. HOM05D000431 ORTHO05D000364 1.2e-06 55.8 60 50.0
Aqoxy5G02660 Aquilegia oxysepala HOM05D000431 ORTHO05D000364 1.6e-06 55.5 65 46.2
Cpa.g.sc118.28 Carica papaya HOM05D000431 ORTHO05D000364 1.6e-06 55.5 63 49.2
Sabra04G0091800 Salix brachista HOM05D000431 ORTHO05D000364 1.6e-06 55.5 61 49.2
COL.COLO4_04355 Corchorus olitorius HOM05D000431 ORTHO05D000364 2.1e-06 55.1 62 46.8
MELO3C008887.2 Cucumis melo HOM05D000431 ORTHO05D000364 2.1e-06 55.1 62 48.4
HanXRQChr11g0343601 Helianthus annuus HOM05D000431 ORTHO05D000364 2.1e-06 55.1 61 49.2
Sed0010216 Sechium edule HOM05D000431 ORTHO05D000364 2.1e-06 55.1 68 48.5
MD08G1236500 Malus domestica HOM05D000431 ORTHO05D000364 3.6e-06 54.3 61 47.5
FAN13G1479 Fragaria x ananassa HOM05D000431 ORTHO05D000364 6.2e-06 53.5 59 50.8
Nn5g27524 Nelumbo nucifera HOM05D000431 ORTHO05D000364 6.2e-06 53.5 64 43.8
Duzib147G0351 Durio zibethinus HOM05D000431 ORTHO05D000364 8.1e-06 53.1 59 44.1
TAR628G0217 Trochodendron aralioides HOM05D000431 ORTHO05D000364 8.1e-06 53.1 63 46.0


User provided reference genes

Program Settings