Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g10690 Coffea canephora HOM05D005443 ORTHO05D011625 2.0e-17 91.3 43 100.0
Prupe.3G135800 Prunus persica HOM05D005443 ORTHO05D009021 6.6e-13 76.3 43 76.7
COL.COLO4_07391 Corchorus olitorius HOM05D005443 ORTHO05D011625 8.6e-13 75.9 43 79.1
Gohir.D02G180550 Gossypium hirsutum HOM05D005443 ORTHO05D011625 2.5e-12 74.3 41 75.6
Sabra19G0111200 Salix brachista HOM05D005443 ORTHO05D009021 2.5e-12 74.3 42 76.2
Sabra19G0112500 Salix brachista HOM05D005443 ORTHO05D009021 2.5e-12 74.3 42 76.2
Gohir.A03G157250 Gossypium hirsutum HOM05D005443 ORTHO05D011625 3.3e-12 73.9 41 75.6
HanXRQChr06g0171351 Helianthus annuus HOM05D005443 ORTHO05D011625 3.3e-12 73.9 43 79.1
Hma1.2p1_1201F.1_g266620 Hydrangea macrophylla HOM05D005443 ORTHO05D011625 7.3e-12 72.8 41 75.6
Glyma.06G293450 Glycine max HOM05D005443 ORTHO05D011625 9.5e-12 72.4 43 72.1
Lsat_1_v5_gn_3_38100 Lactuca sativa HOM05D005443 ORTHO05D011625 9.5e-12 72.4 41 78.0
Glyma.12G111932 Glycine max HOM05D005443 ORTHO05D011625 2.8e-11 70.9 43 69.8
Hma1.2p1_1201F.1_g266670 Hydrangea macrophylla HOM05D005443 ORTHO05D011625 2.8e-11 70.9 41 73.2
Hma1.2p1_3039F.1_g332015 Hydrangea macrophylla HOM05D005443 ORTHO05D011625 2.8e-11 70.9 41 73.2
Manes.12G087300 Manihot esculenta HOM05D005443 ORTHO05D011625 6.2e-11 69.7 42 71.4
Phvul.011G114500 Phaseolus vulgaris HOM05D005443 ORTHO05D011625 6.2e-11 69.7 43 69.8
TAR629G1945 Trochodendron aralioides HOM05D005443 ORTHO05D011625 6.2e-11 69.7 41 73.2
GSVIVG01020531001 Vitis vinifera HOM05D005443 ORTHO05D009021 8.1e-11 69.3 41 70.7
Potri.019G101001 Populus trichocarpa HOM05D005443 ORTHO05D011625 1.8e-10 68.2 42 69.0
Migut.H01083 Erythranthe guttata HOM05D005443 ORTHO05D011625 2.0e-09 64.7 43 67.4
Potri.013G133300 Populus trichocarpa HOM05D005443 ORTHO05D011625 2.6e-09 64.3 42 66.7
CiPaw.04G125300 Carya illinoinensis HOM05D005443 ORTHO05D011625 3.4e-09 63.9 41 68.3
A09p58740 Brassica napus HOM05D005443 ORTHO05D011625 4.4e-09 63.5 43 62.8
Cfa014603 Carpinus fangiana HOM05D005443 ORTHO05D011625 5.8e-09 63.2 39 69.2
BcaB08g34938 Brassica carinata HOM05D005443 ORTHO05D011625 9.9e-09 62.4 43 62.8
AL3G53830 Arabidopsis lyrata HOM05D005443 ORTHO05D011625 1.3e-08 62.0 43 62.8
DCAR_013002 Daucus carota HOM05D005443 ORTHO05D011625 2.2e-08 61.2 41 63.4
Carub.0003s3524 Capsella rubella HOM05D005443 ORTHO05D011625 3.7e-08 60.5 43 60.5
C08p42040 Brassica napus HOM05D005443 ORTHO05D011625 6.4e-08 59.7 43 62.8
A07p00050 Brassica napus HOM05D005443 ORTHO05D011625 4.1e-07 57.0 43 58.1
C07p00190 Brassica napus HOM05D005443 ORTHO05D011625 4.1e-07 57.0 43 58.1
Ca_25912_v3 Cicer arietinum L. HOM05D005443 ORTHO05D009021 7.1e-07 56.2 40 65.0
MBI18_g16994_MAGBIO Magnolia biondii HOM05D000770 ORTHO05D000586 7.1e-07 56.2 32 68.8
Os04g0530200 Oryza sativa ssp. japonica HOM05D005443 ORTHO05D011625 1.6e-06 55.1 44 61.4


User provided reference genes

Program Settings