Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 3.5e-101 371.7 200 100.0
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.8e-36 156.8 210 43.8
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.2e-35 154.1 204 47.1
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.1e-33 147.5 201 45.3
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.1e-33 147.5 209 43.5
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 4.1e-33 145.6 199 47.7
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 9.2e-33 144.4 203 44.8
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.5e-32 142.5 206 43.2
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 3.5e-32 142.5 203 44.8
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 3.5e-32 142.5 203 44.3
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 4.6e-32 142.1 209 43.1
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.0e-32 141.7 207 41.1
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 6.0e-32 141.7 178 47.2
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 7.8e-32 141.4 193 47.2
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 7.8e-32 141.4 193 47.2
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.7e-31 140.2 213 47.4
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 3.0e-31 139.4 204 42.6
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 8.6e-31 137.9 206 41.3
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 8.6e-31 137.9 201 47.8
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.5e-30 137.1 213 41.3
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 4.3e-30 135.6 192 43.8
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 5.6e-30 135.2 209 43.1
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 9.5e-30 134.4 196 43.4
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.2e-29 134.0 206 44.2
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 2.1e-29 133.3 204 41.7
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.8e-29 132.9 207 41.1
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.8e-29 132.9 208 41.8
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.8e-29 132.9 208 41.8
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.8e-29 132.9 208 41.8
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 4.7e-29 132.1 204 43.1
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 8.0e-29 131.3 202 39.6
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 8.0e-29 131.3 218 40.4
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-27 127.5 212 38.2
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.5e-27 127.1 211 38.9
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 2.0e-27 126.7 203 41.9
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.0e-27 126.7 211 39.8
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.6e-27 126.3 206 39.8
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 7.5e-27 124.8 204 39.2
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 7.5e-27 124.8 204 39.2
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 3.7e-26 122.5 210 39.5
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 4.9e-26 122.1 220 39.1
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 4.9e-26 122.1 176 40.9
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 8.3e-26 121.3 190 43.2
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.4e-25 119.8 173 42.2
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.4e-25 118.6 219 38.4
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.4e-25 118.6 219 38.8
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 9.2e-25 117.9 218 38.5
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 9.2e-25 117.9 201 36.3
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 1.2e-24 117.5 219 38.4
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.2e-24 117.5 201 40.3
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 6.0e-24 115.2 212 40.6
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 7.8e-24 114.8 215 37.2
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.3e-23 114.0 203 37.9
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.7e-23 113.6 219 39.3
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.0e-23 112.8 216 36.6
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 5.0e-23 112.1 205 39.5
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 6.6e-23 111.7 186 38.7
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 6.6e-23 111.7 173 41.0
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 6.6e-23 111.7 198 38.4
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.1e-22 110.9 233 33.0
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.9e-22 110.2 186 36.6
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 3.3e-22 109.4 195 40.5
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 4.3e-22 109.0 223 33.2
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 4.3e-22 109.0 227 38.8
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 7.3e-22 108.2 201 39.3
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.2e-21 107.5 182 39.0
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 2.1e-21 106.7 176 41.5
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.1e-21 106.7 195 40.0
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 6.2e-21 105.1 221 33.5
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.1e-20 104.4 178 39.3
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.4e-20 104.0 190 36.3
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.4e-20 104.0 202 38.1
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.4e-20 104.0 226 33.2
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 5.2e-20 102.1 176 39.2
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.2e-20 102.1 195 39.5
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.8e-20 101.7 219 33.8
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.2e-19 100.9 196 35.7
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 7.5e-19 98.2 268 31.3
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.3e-18 97.4 115 50.4
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 3.7e-18 95.9 222 38.7
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.1e-17 94.4 197 35.5
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 1.4e-17 94.0 211 36.0
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.9e-17 93.6 185 38.4
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.9e-17 93.6 179 33.5
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.2e-17 92.8 184 35.3
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.2e-17 92.8 184 35.3
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 3.2e-17 92.8 143 40.6
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.2e-17 92.8 193 35.8
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 4.1e-17 92.4 178 36.5
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.1e-16 90.1 183 34.4
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 3.5e-16 89.4 208 32.2
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 3.5e-16 89.4 218 32.6
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 3.0e-15 86.3 205 31.7
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 5.1e-15 85.5 188 37.2
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 5.1e-15 85.5 184 35.3
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 3.3e-14 82.8 189 34.4
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 4.3e-14 82.4 174 33.9
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 4.3e-14 82.4 195 37.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 4.3e-14 82.4 195 37.9
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 7.3e-14 81.6 165 35.2
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 3.6e-13 79.3 230 31.3
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 5.2e-12 75.5 186 34.4
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.3e-10 70.9 128 39.8
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.4e-09 67.4 238 34.0
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 9.2e-09 64.7 148 33.1
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 1.2e-08 64.3 165 40.0
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 2.1e-08 63.5 208 31.7
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 2.7e-08 63.2 105 40.0
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 4.3e-06 55.8 139 38.1


User provided reference genes

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