Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.2e-100 369.8 185 100.0
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 4.6e-63 245.0 188 65.4
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 6.0e-63 244.6 191 63.9
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 6.0e-63 244.6 194 64.9
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 3.0e-62 242.3 184 67.9
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.5e-61 240.0 189 64.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.3e-60 236.9 198 63.6
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.6e-60 236.5 189 63.0
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.6e-60 236.5 186 63.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.7e-60 235.3 185 64.9
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.1e-59 232.3 184 63.6
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 9.0e-59 230.7 187 62.6
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.0e-58 229.6 192 62.5
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 3.4e-58 228.8 182 61.5
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 5.8e-58 228.0 194 58.2
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.7e-57 226.5 190 61.1
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 2.2e-57 226.1 181 61.9
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.9e-57 225.7 181 61.3
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 3.8e-57 225.3 192 62.5
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 4.9e-57 224.9 191 59.2
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 6.5e-57 224.6 191 59.2
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.1e-56 223.8 193 59.6
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.5e-56 222.6 189 59.8
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 3.2e-56 222.2 180 62.8
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 4.2e-56 221.9 182 63.2
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 9.3e-56 220.7 187 61.5
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.2e-55 220.3 186 58.1
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.7e-55 219.2 194 57.7
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 4.6e-55 218.4 194 61.3
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 4.6e-55 218.4 186 59.1
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 4.6e-55 218.4 193 57.0
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.9e-54 215.3 178 60.7
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 3.9e-54 215.3 178 60.7
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 5.1e-54 214.9 183 59.6
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 6.7e-54 214.5 186 56.5
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 6.7e-54 214.5 185 58.4
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 6.7e-54 214.5 191 57.1
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 6.7e-54 214.5 189 57.1
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 8.7e-54 214.2 192 56.8
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 8.7e-54 214.2 188 58.5
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.1e-53 213.8 182 59.3
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.1e-53 213.8 185 59.5
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.5e-53 213.4 184 59.2
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.5e-53 213.4 190 57.9
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.9e-53 213.0 180 60.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 3.3e-53 212.2 193 56.0
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 5.7e-53 211.5 193 58.0
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.7e-53 211.5 193 58.0
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 5.7e-53 211.5 191 56.5
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 5.7e-53 211.5 178 60.7
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 2.1e-52 209.5 192 56.2
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.8e-52 209.1 185 59.5
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.8e-52 209.1 193 57.5
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.8e-52 209.1 193 57.0
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 2.8e-52 209.1 180 61.1
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 4.8e-52 208.4 194 56.2
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 4.8e-52 208.4 191 56.0
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.4e-51 206.8 191 58.1
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 1.8e-51 206.5 227 50.7
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 1.8e-51 206.5 188 58.0
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 2.4e-51 206.1 186 55.9
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 3.1e-51 205.7 186 57.5
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 4.1e-51 205.3 186 55.9
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 4.1e-51 205.3 193 52.3
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 9.0e-51 204.1 188 56.9
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 9.0e-51 204.1 191 54.5
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 1.2e-50 203.8 129 72.1
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 1.2e-50 203.8 187 56.7
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 2.0e-50 203.0 187 57.8
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.0e-50 203.0 190 52.6
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 2.0e-50 203.0 187 56.7
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 3.4e-50 202.2 191 54.5
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 5.9e-50 201.4 191 53.4
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.3e-49 200.3 189 54.5
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.7e-49 199.9 166 57.8
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 2.9e-49 199.1 189 56.1
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.9e-49 199.1 189 55.0
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 3.8e-49 198.7 188 56.4
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 6.5e-49 198.0 189 55.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 6.5e-49 198.0 189 55.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.1e-48 197.2 197 54.3
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.9e-48 196.4 190 57.4
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 4.2e-48 195.3 188 53.2
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 5.5e-48 194.9 187 53.5
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.2e-47 193.7 189 54.5
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.6e-47 193.4 189 54.5
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 2.7e-47 192.6 190 53.7
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 4.6e-47 191.8 180 56.1
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 4.6e-47 191.8 180 56.1
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 4.6e-47 191.8 180 56.1
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 6.1e-47 191.4 131 66.4
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.3e-46 190.3 188 53.2
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 2.2e-44 183.0 188 54.3
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.8e-44 182.6 129 62.8
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 3.7e-44 182.2 196 46.4
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.4e-43 179.5 119 69.7
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 3.1e-43 179.1 190 50.5
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 5.3e-43 178.3 155 59.4
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.7e-42 174.5 114 69.3
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 8.5e-41 171.0 111 73.0
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-40 170.6 170 55.3
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.5e-40 169.5 164 54.9
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.2e-40 168.7 148 54.7
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 2.7e-39 166.0 192 47.9
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 3.1e-35 152.5 186 48.4
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 3.1e-35 152.5 191 44.0
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 3.4e-34 149.1 123 60.2
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.3e-33 147.1 192 43.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 4.7e-31 138.7 174 47.7
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.3e-30 136.3 95 63.2
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.1e-29 134.0 81 77.8
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.5e-29 133.7 182 41.2
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.3e-28 130.6 95 62.1
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 3.1e-27 125.9 98 57.1
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.7e-25 120.2 112 58.0
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.1e-24 117.5 128 55.5
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.0e-22 110.9 64 76.6
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 7.7e-18 94.7 181 34.8
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 9.4e-16 87.8 171 31.6
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 2.7e-15 86.3 129 38.0
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 1.8e-14 83.6 93 47.3
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 3.0e-14 82.8 101 49.5
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 3.1e-11 72.8 114 31.6
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.0e-09 67.8 97 47.4
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 2.5e-08 63.2 44 63.6
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 5.2e-06 55.5 38 60.5
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 8.8e-06 54.7 39 64.1


User provided reference genes

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