Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g09650 Coffea canephora HOM05D010013 ORTHO05D012216 4.8e-207 724.2 342 100.0
Cc06_g22170 Coffea canephora HOM05D010013 ORTHO05D012216 3.8e-188 661.4 361 88.1
Cc09_g07630 Coffea canephora HOM05D010013 ORTHO05D012216 3.8e-127 458.8 245 86.9
Cc00_g05960 Coffea canephora HOM05D010013 ORTHO05D012216 4.3e-107 392.1 235 79.1
Cc00_g16110 Coffea canephora HOM05D010013 ORTHO05D012216 3.7e-106 389.0 202 87.1
Cc00_g00400 Coffea canephora HOM05D010013 ORTHO05D012216 1.0e-103 380.9 217 85.3
Cc04_g11010 Coffea canephora HOM05D010013 ORTHO05D012216 7.6e-96 354.8 347 49.3
Cc05_g02180 Coffea canephora HOM05D010013 ORTHO05D012216 3.0e-84 316.2 319 48.3
Cc00_g32930 Coffea canephora HOM05D010013 ORTHO05D012216 2.6e-80 303.1 149 94.0
Cc00_g25710 Coffea canephora HOM05D010013 ORTHO05D012216 1.3e-79 300.8 149 93.3
Lsat_1_v5_gn_2_76081 Lactuca sativa HOM05D010013 ORTHO05D012216 2.6e-75 286.6 288 46.5
Cc00_g32190 Coffea canephora HOM05D010013 ORTHO05D012216 2.6e-67 260.0 139 82.7
COL.COLO4_00109 Corchorus olitorius HOM05D010013 ORTHO05D012216 9.1e-65 251.5 273 46.9
Rhsim10G0100100 Rhododendron simsii HOM05D010013 ORTHO05D012216 1.4e-60 237.7 299 41.5
Cc00_g26110 Coffea canephora HOM05D010013 ORTHO05D012216 3.3e-54 216.5 114 85.1
Cc02_g30240 Coffea canephora HOM05D010013 ORTHO05D012216 2.1e-45 187.2 113 78.8
HanXRQChr11g0352931 Helianthus annuus HOM05D010013 ORTHO05D012216 8.6e-39 165.2 207 42.5
HanXRQChr16g0498311 Helianthus annuus HOM05D010013 ORTHO05D012216 4.4e-35 152.9 156 50.0
Cc00_g23420 Coffea canephora HOM05D010013 ORTHO05D012216 8.6e-31 138.7 131 46.6
CiPaw.13G133300 Carya illinoinensis HOM05D010013 ORTHO05D012216 7.3e-22 109.0 91 54.9
Cc04_g11020 Coffea canephora HOM05D010013 ORTHO05D012216 1.4e-20 104.8 109 45.9
MD10G1177400 Malus domestica HOM05D010013 ORTHO05D012216 1.4e-20 104.8 174 37.4
MD10G1177300 Malus domestica HOM05D010013 ORTHO05D012216 8.9e-20 102.1 174 36.2
Sc03g0002230 Simmondsia chinensis HOM05D010013 ORTHO05D012216 6.6e-15 85.9 134 34.3


User provided reference genes

Program Settings