Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g09360 Coffea canephora HOM05D004446 ORTHO05D005346 2.3e-78 295.4 144 100.0
Manes.03G155100 Manihot esculenta HOM05D004446 ORTHO05D005346 8.5e-73 276.9 144 92.4
MSTRG.24643 Avicennia marina HOM05D004446 ORTHO05D005346 9.4e-72 273.5 144 89.6
Gohir.A10G120100 Gossypium hirsutum HOM05D004446 ORTHO05D005346 9.4e-72 273.5 144 90.3
Gohir.D10G146300 Gossypium hirsutum HOM05D004446 ORTHO05D005346 9.4e-72 273.5 144 90.3
Gorai.011G163400 Gossypium raimondii HOM05D004446 ORTHO05D005346 9.4e-72 273.5 144 90.3
CSS0043422 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 1.2e-71 273.1 144 89.6
CSS0044163 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 1.2e-71 273.1 144 89.6
Thecc.04G215500 Theobroma cacao HOM05D004446 ORTHO05D005346 1.2e-71 273.1 144 89.6
Gohir.A10G120200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 1.6e-71 272.7 144 88.9
Gohir.D10G146200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 2.1e-71 272.3 144 88.9
Duzib212G0284 Durio zibethinus HOM05D004446 ORTHO05D005346 6.1e-71 270.8 144 88.2
Gorai.011G163300 Gossypium raimondii HOM05D004446 ORTHO05D005346 6.1e-71 270.8 144 88.2
HanXRQChr06g0183261 Helianthus annuus HOM05D004446 ORTHO05D005346 6.1e-71 270.8 144 88.2
Potri.001G054500 Populus trichocarpa HOM05D004446 ORTHO05D005346 8.0e-71 270.4 144 88.9
Ciclev10006172m.g Citrus clementina HOM05D004446 ORTHO05D005346 1.0e-70 270.0 144 88.2
COL.COLO4_05729 Corchorus olitorius HOM05D004446 ORTHO05D005346 1.0e-70 270.0 144 88.2
Hund19262 Selenicereus undatus HOM05D004446 ORTHO05D005346 1.0e-70 270.0 144 88.9
Cpa.g.sc59.66 Carica papaya HOM05D004446 ORTHO05D005346 1.4e-70 269.6 144 87.5
Manes.15G048500 Manihot esculenta HOM05D004446 ORTHO05D005346 1.4e-70 269.6 144 88.9
Lsat_1_v5_gn_2_41880 Lactuca sativa HOM05D004446 ORTHO05D005346 1.8e-70 269.2 143 87.4
vmacro00521 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 1.8e-70 269.2 144 87.5
CANSAT78G0709 Cannabis sativa HOM05D004446 ORTHO05D005346 2.3e-70 268.9 144 88.2
CiPaw.02G127900 Carya illinoinensis HOM05D004446 ORTHO05D005346 2.3e-70 268.9 144 87.5
DCAR_027363 Daucus carota HOM05D004446 ORTHO05D005346 2.3e-70 268.9 144 87.5
Sed0017441 Sechium edule HOM05D004446 ORTHO05D005346 2.3e-70 268.9 144 86.8
Potri.003G173800 Populus trichocarpa HOM05D004446 ORTHO05D005346 4.0e-70 268.1 144 86.8
HanXRQChr14g0434271 Helianthus annuus HOM05D004446 ORTHO05D005346 5.2e-70 267.7 144 86.8
SalBow2G1310 Salvia bowleyana HOM05D004446 ORTHO05D005346 5.2e-70 267.7 144 86.8
SGA_v2.0_scaffold155G37240 Striga asiatica HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 87.5
Aqoxy3G02680 Aquilegia oxysepala HOM05D004446 ORTHO05D005346 8.8e-70 266.9 144 87.5
Atru.chr4.1819 Acer truncatum HOM05D004446 ORTHO05D005346 2.0e-69 265.8 144 86.1
ECA238G1521 Erigeron canadensis HOM05D004446 ORTHO05D005346 2.0e-69 265.8 144 86.1
Zm00001eb008370 Zea mays HOM05D004446 ORTHO05D005346 2.0e-69 265.8 144 86.1
Solyc09g091170.4 Solanum lycopersicum HOM05D004446 ORTHO05D005346 2.6e-69 265.4 144 87.5
Sopen09g034140 Solanum pennellii HOM05D004446 ORTHO05D005346 2.6e-69 265.4 144 87.5
AL1G14310 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 4.4e-69 264.6 144 87.5
MD13G1228700 Malus domestica HOM05D004446 ORTHO05D005346 5.7e-69 264.2 144 86.1
Rhsim09G0047000 Rhododendron simsii HOM05D004446 ORTHO05D005346 5.7e-69 264.2 151 84.1
RhsimUnG0181300 Rhododendron simsii HOM05D004446 ORTHO05D005346 5.7e-69 264.2 151 84.1
FvH4_4g05410 Fragaria vesca HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 86.1
FAN07G2016 Fragaria x ananassa HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 86.1
FAN12G2493 Fragaria x ananassa HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 86.1
FAN12G4338 Fragaria x ananassa HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 86.1
MD16G1234000 Malus domestica HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 85.4
PGR044G1212 Punica granatum HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 86.8
PGSC0003DMG400011587 Solanum tuberosum HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 87.5
arahy.Tifrunner.gnm1.ann1.VC13RQ Arachis hypogaea HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 85.4
CARHR003980 Cardamine hirsuta HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.8
CiPaw.01G206200 Carya illinoinensis HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.1
AUR62035332 Chenopodium quinoa HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.1
ClCG06G007390 Citrullus lanatus HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.1
CsaV3_2G012290 Cucumis sativus L. HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.1
Nn2g14612 Nelumbo nucifera HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.8
HPP92_008960 Vanilla planifolia HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 84.7
AL4G28840 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 86.8
Nitab4.5_0000451g0180 Nicotiana tabacum HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 86.1
Nitab4.5_0018759g0010 Nicotiana tabacum HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 86.1
Sc19g0005800 Simmondsia chinensis HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 86.1
THA.LOC104826105 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 86.1
AT1G04630 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 86.1
Carub.0001s0386 Capsella rubella HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 86.1
Eucgr.H02865 Eucalyptus grandis HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 85.4
Peaxi162Scf00047g01619 Petunia axillaris HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 86.1
Aa31LG1G20240 Aethionema arabicum HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 85.4
EL10Ac3g06748 Beta vulgaris HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 86.1
Lsat_1_v5_gn_2_41141 Lactuca sativa HOM05D004446 ORTHO05D005346 2.8e-68 261.9 141 86.5
Nn5g27558 Nelumbo nucifera HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 85.4
RcHm_v2.0_Chr4g0396561 Rosa chinensis HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 85.4
BcaC07g36901 Brassica carinata HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
A08p36850 Brassica napus HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
A09p67770 Brassica napus HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
A10p03060 Brassica napus HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
C05p02820 Brassica napus HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
C08p01220 Brassica napus HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
BolC5t29065H Brassica oleracea HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
BolC8t46930H Brassica oleracea HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
BraA08t35586Z Brassica rapa HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
BraA09t42108Z Brassica rapa HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
BraA10t42579Z Brassica rapa HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
Thhalv10017386m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
Sp1g03460 Schrenkiella parvula HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 86.1
TWI73G1246 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 84.7
Aa31LG5G4110 Aethionema arabicum HOM05D004446 ORTHO05D005346 4.8e-68 261.2 144 85.4
CDE04G3627 Ceratophyllum demersum HOM05D004446 ORTHO05D005346 4.8e-68 261.2 144 85.4
MELO3C023063.2 Cucumis melo HOM05D004446 ORTHO05D005346 4.8e-68 261.2 144 85.4
Thhalv10009042m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 4.8e-68 261.2 144 86.1
Actinidia35938 Actinidia chinensis HOM05D004446 ORTHO05D005346 6.3e-68 260.8 144 84.0
Prupe.1G056200 Prunus persica HOM05D004446 ORTHO05D005346 6.3e-68 260.8 144 84.7
THA.LOC104816014 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 6.3e-68 260.8 144 85.4
BcaB03g13480 Brassica carinata HOM05D004446 ORTHO05D005346 8.3e-68 260.4 144 85.4
TWI09G0335 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 8.3e-68 260.4 144 84.7
Zm00001eb401250 Zea mays HOM05D004446 ORTHO05D005346 8.3e-68 260.4 144 84.7
CARHR127230 Cardamine hirsuta HOM05D004446 ORTHO05D005346 1.1e-67 260.0 144 85.4
Carub.0004s1468 Capsella rubella HOM05D004446 ORTHO05D005346 1.4e-67 259.6 144 86.1
Phvul.007G238600 Phaseolus vulgaris HOM05D004446 ORTHO05D005346 1.4e-67 259.6 144 83.3
Sp4g15520 Schrenkiella parvula HOM05D004446 ORTHO05D005346 2.4e-67 258.8 144 84.7
TAR362G0142 Trochodendron aralioides HOM05D004446 ORTHO05D005346 2.4e-67 258.8 144 84.0
AT2G33220 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 4.1e-67 258.1 142 86.6
Medtr1g046380 Medicago truncatula HOM05D004446 ORTHO05D005346 4.1e-67 258.1 144 84.0
arahy.Tifrunner.gnm1.ann1.Q5T5LU Arachis hypogaea HOM05D004446 ORTHO05D005346 5.4e-67 257.7 142 84.5
TPR.G23640 Trifolium pratense HOM05D004446 ORTHO05D005346 7.0e-67 257.3 144 84.0
Lj6g0002383 Lotus japonicus HOM05D004446 ORTHO05D005346 9.1e-67 256.9 144 82.6
Glyma.20G079400 Glycine max HOM05D004446 ORTHO05D005346 1.2e-66 256.5 144 83.3
TAR365G0553 Trochodendron aralioides HOM05D004446 ORTHO05D005346 1.2e-66 256.5 144 84.0
Psat6g109720 Pisum sativum HOM05D004446 ORTHO05D005346 1.6e-66 256.1 144 83.3
VMungo0720G0669 Vigna mungo HOM05D004446 ORTHO05D005346 1.6e-66 256.1 144 82.6
ATR0736G077 Amborella trichopoda HOM05D004446 ORTHO05D005346 2.7e-66 255.4 144 81.9
Lalb_Chr01g0011251 Lupinus albus HOM05D004446 ORTHO05D005346 2.7e-66 255.4 144 80.6
TAR633G2153 Trochodendron aralioides HOM05D004446 ORTHO05D005346 3.5e-66 255.0 142 84.5
PSO782G0825 Papaver somniferum HOM05D004446 ORTHO05D005346 5.9e-66 254.2 144 83.3
Lalb_Chr03g0036811 Lupinus albus HOM05D004446 ORTHO05D005346 7.7e-66 253.8 144 81.2
vmacro22557 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 1.0e-65 253.4 154 79.9
Glyma.10G128100 Glycine max HOM05D004446 ORTHO05D005346 2.9e-65 251.9 144 81.9
Hma1.2p1_2329F.1_g320020 Hydrangea macrophylla HOM05D004446 ORTHO05D005346 5.0e-65 251.1 175 72.6
PSO063G0015 Papaver somniferum HOM05D004446 ORTHO05D005346 5.0e-65 251.1 144 82.6
Ca_11789_v3 Cicer arietinum L. HOM05D004446 ORTHO05D005346 1.1e-64 250.0 144 81.2
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 4.2e-64 248.1 135 86.7
QL06p022604 Quercus lobata HOM05D004446 ORTHO05D005346 4.2e-64 248.1 143 80.4
Migut.G00605 Erythranthe guttata HOM05D004446 ORTHO05D005346 9.5e-64 246.9 144 83.3
AUR62035909 Chenopodium quinoa HOM05D004446 ORTHO05D005346 6.1e-63 244.2 135 85.9
SEGI_11387 Sequoiadendron giganteum HOM05D004446 ORTHO05D005346 5.7e-61 237.7 144 75.0
Os03g0192400 Oryza sativa ssp. japonica HOM05D004446 ORTHO05D005346 5.4e-59 231.1 139 79.1
BcaC07g42166 Brassica carinata HOM05D004446 ORTHO05D005346 5.0e-57 224.6 144 77.8
Sabra03G0127300 Salix brachista HOM05D004446 ORTHO05D005346 2.1e-55 219.2 260 48.1
Actinidia25089 Actinidia chinensis HOM05D004446 ORTHO05D005346 8.9e-54 213.8 177 61.6
Ah.13g075110 Amaranthus hybridus HOM05D004446 ORTHO05D005346 1.7e-52 209.5 144 70.8
Sabra01G0039000 Salix brachista HOM05D004446 ORTHO05D005346 1.1e-51 206.8 308 42.2
BolC3t14561H Brassica oleracea HOM05D004446 ORTHO05D005346 4.1e-51 204.9 140 74.3
AagrBONN_evm.TU.Sc2ySwM_344.5082 Anthoceros agrestis HOM05D004446 ORTHO05D005346 6.0e-50 201.1 144 67.4
Pp3c5_4240 Physcomitrium patens HOM05D004446 ORTHO05D005346 2.3e-49 199.1 141 66.7
Pp3c16_2570 Physcomitrium patens HOM05D004446 ORTHO05D005346 3.3e-48 195.3 141 66.0
Mapoly0001s0090 Marchantia polymorpha HOM05D004446 ORTHO05D005346 5.6e-48 194.5 142 64.8
CBR_g9031 Chara braunii HOM05D004446 ORTHO05D005346 2.1e-47 192.6 138 66.7
BolC8t52743H Brassica oleracea HOM05D004446 ORTHO05D005346 1.4e-46 189.9 117 80.3
unitig_748.g8289 Utricularia gibba HOM05D002765 ORTHO05D003083 1.4e-46 189.9 142 67.6
GSVIVG01028486001 Vitis vinifera HOM05D004446 ORTHO05D005346 1.1e-38 163.7 84 90.5
Dinv27149 Davidia involucrata HOM05D004446 ORTHO05D005346 3.4e-37 158.7 82 89.0
MCO16G128 Micromonas commoda HOM05D004446 ORTHO05D005346 2.9e-36 155.6 142 54.2
C08p52100 Brassica napus HOM05D004446 ORTHO05D005346 3.7e-36 155.2 93 79.6
Oeu008823.1 Olea europaea HOM05D004446 ORTHO05D005346 2.7e-34 149.1 72 97.2
RhsimUnG0181500 Rhododendron simsii HOM05D004446 ORTHO05D005346 3.9e-33 145.2 75 88.0
CAN.G1588.2 Capsicum annuum HOM05D004446 ORTHO05D005346 5.1e-33 144.8 75 89.3
Haze_11535 Corylus avellana HOM05D004446 ORTHO05D005346 6.6e-33 144.4 89 76.4
A03p18650 Brassica napus HOM05D004446 ORTHO05D005346 2.5e-32 142.5 73 90.4
BraA03t11124Z Brassica rapa HOM05D004446 ORTHO05D005346 2.5e-32 142.5 73 90.4
Cre16.g664600 Chlamydomonas reinhardtii HOM05D004446 ORTHO05D005346 7.6e-29 131.0 133 48.1
SMO364G0175 Selaginella moellendorffii HOM05D004446 ORTHO05D005346 6.4e-28 127.9 143 46.9
Zm00001eb305890 Zea mays HOM05D004446 ORTHO05D005346 3.9e-25 118.6 133 50.4
BcaC01g05851 Brassica carinata HOM05D004446 ORTHO05D005346 1.9e-24 116.3 66 83.3
Cc05_g03600 Coffea canephora HOM05D004446 ORTHO05D005346 3.3e-24 115.5 74 79.7
MBI10_g35300_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 8.1e-23 110.9 152 47.4
Oeu008826.1 Olea europaea HOM05D004446 ORTHO05D005346 1.8e-22 109.8 64 79.7
MBI10_g44933_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 9.0e-22 107.5 63 77.8
SHI08306 Sapria himalayana HOM05D004446 ORTHO05D005346 2.4e-14 82.8 63 61.9
C03p21790 Brassica napus HOM05D004446 ORTHO05D005346 5.3e-14 81.6 46 82.6
PRCOL_00006069 Prasinoderma coloniale HOM05D004446 ORTHO05D005346 1.1e-11 73.9 99 39.4
SHI22881 Sapria himalayana HOM05D004446 ORTHO05D005346 5.4e-11 71.6 54 64.8
CSS0009466 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-07 60.1 30 83.3


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