Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g08330 Coffea canephora HOM05D000096 ORTHO05D000045 1.3e-151 539.7 271 100.0
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 1.5e-134 483.0 252 95.2
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 1.5e-46 190.7 253 43.5
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 6.8e-39 165.2 185 47.0
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 5.4e-28 129.0 108 51.9
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.1e-28 128.6 102 54.9
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.2e-28 128.3 102 54.9
Hma1.2p1_0115F.1_g055970 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.6e-27 127.5 92 60.9
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 7.8e-27 125.2 104 52.9
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.8e-27 125.2 95 58.9
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-26 124.8 102 54.9
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.3e-26 123.6 102 52.0
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.3e-26 123.6 109 51.4
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.0e-26 123.2 232 36.6
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 3.0e-26 123.2 99 58.6
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 3.9e-26 122.9 99 53.5
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.1e-26 122.5 107 52.3
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-25 121.3 116 47.4
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-25 121.3 86 60.5
EL10Ac2g03227 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-25 119.8 92 57.6
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.3e-25 118.6 86 60.5
Oeu043599.1 Olea europaea HOM05D000096 ORTHO05D000045 7.3e-25 118.6 102 55.9
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.5e-25 118.2 102 52.9
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-24 117.9 98 51.0
Oeu017259.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-24 117.5 91 58.2
Oeu063187.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-24 117.5 102 54.9
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-24 116.3 254 34.6
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 4.7e-24 115.9 92 58.7
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 1.1e-23 114.8 116 47.4
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-23 114.0 254 33.9
CiPaw.09G109800 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.9e-23 111.7 86 57.0
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 2.0e-22 110.5 99 49.5
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 2.0e-22 110.5 87 58.6
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 2.0e-22 110.5 115 44.3
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 3.4e-22 109.8 104 49.0
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 4.4e-22 109.4 138 45.7
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.8e-22 109.0 96 51.0
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 5.8e-22 109.0 92 54.3
Oeu034682.1 Olea europaea HOM05D000096 ORTHO05D000045 5.8e-22 109.0 102 52.9
SGA_v2.0_scaffold511G52630 Striga asiatica HOM05D000096 ORTHO05D000045 9.9e-22 108.2 104 51.9
Oeu049649.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-21 107.5 102 51.0
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 2.9e-21 106.7 102 47.1
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 6.4e-21 105.5 99 47.5
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 8.4e-21 105.1 92 48.9
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 8.4e-21 105.1 104 47.1
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 1.9e-20 104.0 105 47.6
Oeu060826.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-20 104.0 105 50.5
ECA055G0001 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.2e-20 102.8 106 48.1
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 4.2e-20 102.8 113 42.5
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 4.2e-20 102.8 154 41.6
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.4e-20 102.4 158 38.6
Rhsim02G0156100 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.2e-19 101.3 94 47.9
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-19 100.5 91 49.5
Oeu032961.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-19 100.5 102 51.0
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-19 100.5 159 37.1
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.6e-19 99.4 71 59.2
SGA_v2.0_scaffold260G45870 Striga asiatica HOM05D000096 ORTHO05D000045 6.0e-19 99.0 80 58.8
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.3e-18 97.8 71 57.7
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 1.3e-18 97.8 93 47.3
Oeu046628.1 Olea europaea HOM05D000096 ORTHO05D000045 3.0e-18 96.7 100 48.0
Oeu053513.1 Olea europaea HOM05D000096 ORTHO05D000045 5.1e-18 95.9 144 39.6
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.6e-18 95.5 87 50.6
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 1.1e-17 94.7 98 42.9
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-17 94.7 72 56.9
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-17 94.4 99 45.5
Oeu003460.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-17 94.4 151 40.4
Oeu057913.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-17 94.4 112 47.3
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 1.9e-17 94.0 93 45.2
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.5e-17 93.6 95 46.3
EL10Ac7g17652 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-17 93.2 71 56.3
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-17 93.2 112 42.9
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 3.3e-17 93.2 107 42.1
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 4.3e-17 92.8 123 39.8
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 4.3e-17 92.8 123 39.8
Oeu006695.1 Olea europaea HOM05D000096 ORTHO05D000045 4.3e-17 92.8 177 37.3
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-17 92.4 99 45.5
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 5.6e-17 92.4 86 47.7
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-16 91.3 99 44.4
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 1.6e-16 90.9 99 45.5
Oeu059201.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-16 90.9 92 47.8
Oeu041800.1 Olea europaea HOM05D000096 ORTHO05D000045 2.8e-16 90.1 137 40.1
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 3.6e-16 89.7 99 44.4
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 3.6e-16 89.7 155 38.1
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 6.2e-16 89.0 99 44.4
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 8.1e-16 88.6 67 56.7
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-15 87.8 113 43.4
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 1.8e-15 87.4 149 37.6
Oeu004075.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-15 87.0 88 47.7
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 3.1e-15 86.7 137 38.7
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 3.1e-15 86.7 151 38.4
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 4.0e-15 86.3 109 36.7
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 5.3e-15 85.9 93 43.0
Oeu017794.1 Olea europaea HOM05D000096 ORTHO05D000045 5.3e-15 85.9 149 37.6
PSO478G3149 Papaver somniferum HOM05D000096 ORTHO05D000045 6.9e-15 85.5 109 39.4
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 9.0e-15 85.1 123 38.2
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 9.0e-15 85.1 67 55.2
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-14 84.3 117 40.2
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.5e-14 84.3 92 40.2
PSO210G0169 Papaver somniferum HOM05D000096 ORTHO05D000045 2.0e-14 84.0 88 45.5
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-14 83.6 96 39.6
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 5.8e-14 82.4 92 38.0
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 7.6e-14 82.0 79 48.1
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 7.6e-14 82.0 71 53.5
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 7.6e-14 82.0 79 49.4
AUR62031758 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.3e-13 81.3 93 37.6
Oeu023668.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-13 81.3 121 38.0
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-13 80.5 101 36.6
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 2.2e-13 80.5 92 40.2
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 2.9e-13 80.1 98 38.8
CAN.G265.7 Capsicum annuum HOM05D000096 ORTHO05D000045 4.9e-13 79.3 94 37.2
Oeu039607.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-12 77.8 80 51.2
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-12 77.4 68 55.9
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 3.2e-12 76.6 152 35.5
Phvul.008G074400 Phaseolus vulgaris HOM05D000096 ORTHO05D000045 3.2e-12 76.6 86 37.2
PSO063G0288 Papaver somniferum HOM05D000096 ORTHO05D000045 5.4e-12 75.9 92 42.4
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 5.4e-12 75.9 92 42.4
Oeu029175.1 Olea europaea HOM05D000096 ORTHO05D000045 7.1e-12 75.5 57 59.6
Oeu023240.2 Olea europaea HOM05D000096 ORTHO05D000045 9.3e-12 75.1 91 41.8
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 1.2e-11 74.7 53 64.2
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 1.6e-11 74.3 45 71.1
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-11 73.9 53 60.4
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 2.7e-11 73.6 76 44.7
SGA_v2.0_scaffold183G39859 Striga asiatica HOM05D000096 ORTHO05D000045 2.7e-11 73.6 94 40.4
AUR62004426 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.5e-11 73.2 192 27.1
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 3.5e-11 73.2 53 58.5
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 3.5e-11 73.2 52 59.6
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 3.5e-11 73.2 84 40.5
Migut.M00581 Erythranthe guttata HOM05D000096 ORTHO05D000045 6.0e-11 72.4 93 40.9
Oeu025879.1 Olea europaea HOM05D000096 ORTHO05D000045 6.0e-11 72.4 57 57.9
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 7.8e-11 72.0 81 38.3
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 7.8e-11 72.0 102 35.3
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 7.8e-11 72.0 102 35.3
SGA_v2.0_scaffold46G17401 Striga asiatica HOM05D000096 ORTHO05D000045 1.0e-10 71.6 68 51.5
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 1.3e-10 71.2 46 67.4
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 1.7e-10 70.9 99 38.4
Peaxi162Scf00371g00316 Petunia axillaris HOM05D002261 ORTHO05D000045 1.7e-10 70.9 123 36.6
Zm00001eb245660 Zea mays HOM05D002425 ORTHO05D002709 3.9e-10 69.7 100 38.0
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.6e-10 68.9 86 40.7
Zm00001eb175090 Zea mays HOM05D008064 ORTHO05D000045 1.1e-09 68.2 100 37.0
EL10Ac6g14190 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-09 66.6 74 41.9
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 3.3e-09 66.6 62 45.2
COL.COLO4_30364 Corchorus olitorius HOM05D000096 ORTHO05D000045 5.6e-09 65.9 67 41.8
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 7.3e-09 65.5 102 37.3
Zm00001eb137660 Zea mays HOM05D008064 ORTHO05D000045 1.3e-08 64.7 88 39.8
Zm00001eb337580 Zea mays HOM05D008064 ORTHO05D000045 1.3e-08 64.7 88 39.8
Zm00001eb399410 Zea mays HOM05D008064 ORTHO05D000045 1.3e-08 64.7 88 39.8
Zm00001eb373410 Zea mays HOM05D008064 ORTHO05D000045 3.6e-08 63.2 115 33.0
Oeu061219.1 Olea europaea HOM05D000096 ORTHO05D000045 6.2e-08 62.4 56 50.0
Oeu055986.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-07 61.6 56 50.0
Dinv06235 Davidia involucrata HOM05D015775 ORTHO05D000045 1.8e-07 60.8 86 37.2
COL.COLO4_35927 Corchorus olitorius HOM05D000096 ORTHO05D000045 9.0e-07 58.5 56 46.4
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 9.0e-07 58.5 62 48.4
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-06 58.2 59 44.1
ECA232G1482 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-06 58.2 135 29.6
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 3.4e-06 56.6 56 50.0
Hma1.2p1_0146F.1_g065470 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.5e-06 56.2 103 35.9
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 9.9e-06 55.1 56 48.2


User provided reference genes

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