Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g08230 Coffea canephora HOM05D000092 ORTHO05D000042 3.6e-85 318.2 156 100.0
Cc06_g19650 Coffea canephora HOM05D000092 ORTHO05D000042 1.3e-63 246.5 122 98.4
Cc00_g13170 Coffea canephora HOM05D000092 ORTHO05D000042 1.9e-62 242.7 122 97.5
Cc03_g14770 Coffea canephora HOM05D000092 ORTHO05D000042 1.2e-35 153.7 120 68.3
Cc00_g13150 Coffea canephora HOM05D000092 ORTHO05D000042 5.9e-35 151.4 131 63.4
Cc00_g22090 Coffea canephora HOM05D000092 ORTHO05D000042 4.2e-33 145.2 135 59.3
Cc06_g19740 Coffea canephora HOM05D000092 ORTHO05D000042 2.1e-32 142.9 131 59.5
Cc06_g19720 Coffea canephora HOM05D000092 ORTHO05D000042 7.9e-24 114.4 131 52.7
Cc00_g24460 Coffea canephora HOM05D000092 ORTHO05D000042 7.4e-22 107.8 127 48.8
Oeu027648.2 Olea europaea HOM05D000092 ORTHO05D000042 7.7e-11 71.2 119 36.1
Cc00_g15430 Coffea canephora HOM05D000092 ORTHO05D000042 4.2e-09 65.5 54 61.1
Oeu016047.1 Olea europaea HOM05D000092 ORTHO05D000042 5.5e-09 65.1 117 31.6
Lju124C46T9 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-08 63.9 146 34.9
Duzib106G0568 Durio zibethinus HOM05D000092 ORTHO05D000042 1.4e-07 60.5 114 35.1
Lju124A47T118 Lonicera japonica HOM05D000092 ORTHO05D000042 1.4e-07 60.5 151 36.4
Glyma.18G226500 Glycine max HOM05D000092 ORTHO05D000042 3.0e-07 59.3 126 36.5
Manes.08G163511 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-07 59.3 112 37.5
TPR.G13790 Trifolium pratense HOM05D000092 ORTHO05D000042 4.0e-07 58.9 114 32.5
ECA238G0070 Erigeron canadensis HOM05D000092 ORTHO05D000042 5.2e-07 58.5 128 31.2
Oeu015351.2 Olea europaea HOM05D000092 ORTHO05D000042 5.2e-07 58.5 122 32.8
Thecc.05G203000 Theobroma cacao HOM05D000092 ORTHO05D000042 5.2e-07 58.5 112 34.8
Lj3P572T22 Lonicera japonica HOM05D000092 ORTHO05D000042 6.7e-07 58.2 134 33.6
CANSAT11G1868 Cannabis sativa HOM05D000092 ORTHO05D000042 8.8e-07 57.8 135 32.6
Atru.chr2.1458 Acer truncatum HOM05D000092 ORTHO05D000042 1.2e-06 57.4 133 31.6
Glyma.18G226850 Glycine max HOM05D000092 ORTHO05D000042 1.2e-06 57.4 110 37.3
Glyma.18G226300 Glycine max HOM05D000092 ORTHO05D000042 1.5e-06 57.0 110 35.5
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.5e-06 57.0 88 39.8
TPR.G1456 Trifolium pratense HOM05D000092 ORTHO05D000042 1.5e-06 57.0 121 33.9
Duzib177G0107 Durio zibethinus HOM05D000092 ORTHO05D000042 2.0e-06 56.6 115 32.2
Oeu009134.1 Olea europaea HOM05D000092 ORTHO05D000042 2.0e-06 56.6 114 32.5
GSVIVG01026731001 Vitis vinifera HOM05D000092 ORTHO05D000042 2.0e-06 56.6 110 36.4
arahy.Tifrunner.gnm1.ann1.BPD95K Arachis hypogaea HOM05D000092 ORTHO05D000042 2.6e-06 56.2 89 38.2
arahy.Tifrunner.gnm1.ann1.TXZ93S Arachis hypogaea HOM05D000092 ORTHO05D000042 2.6e-06 56.2 89 38.2
Ca_06863_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 2.6e-06 56.2 112 33.9
Dinv40742 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-06 56.2 128 29.7
Duzib106G1138 Durio zibethinus HOM05D000092 ORTHO05D000042 2.6e-06 56.2 114 34.2
Duzib128G0434 Durio zibethinus HOM05D000092 ORTHO05D000042 3.3e-06 55.8 69 44.9
Lsat_1_v5_gn_2_5761 Lactuca sativa HOM05D000092 ORTHO05D000042 3.3e-06 55.8 118 32.2
Oeu063788.1 Olea europaea HOM05D000092 ORTHO05D000042 3.3e-06 55.8 115 35.7
Peaxi162Scf00003g05030 Petunia axillaris HOM05D000092 ORTHO05D000042 3.3e-06 55.8 119 31.1
Rhsim04G0114200 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.3e-06 55.8 98 39.8
Duzib106G0813 Durio zibethinus HOM05D000092 ORTHO05D000042 4.4e-06 55.5 105 36.2
Duzib177G0994 Durio zibethinus HOM05D000092 ORTHO05D000042 5.7e-06 55.1 113 34.5
Oeu049257.1 Olea europaea HOM05D000092 ORTHO05D000042 5.7e-06 55.1 105 33.3
Psat5g221880 Pisum sativum HOM05D000092 ORTHO05D000042 5.7e-06 55.1 94 38.3
RcHm_v2.0_Chr6g0304941 Rosa chinensis HOM05D000092 ORTHO05D000042 5.7e-06 55.1 112 33.9
Thecc.05G297300 Theobroma cacao HOM05D000092 ORTHO05D000042 5.7e-06 55.1 67 40.3
Duzib106G1201 Durio zibethinus HOM05D000092 ORTHO05D000042 7.5e-06 54.7 69 39.1
Lsat_1_v5_gn_2_29860 Lactuca sativa HOM05D000092 ORTHO05D000042 7.5e-06 54.7 137 33.6
GSVIVG01022044001 Vitis vinifera HOM05D000092 ORTHO05D000042 7.5e-06 54.7 134 30.6
Duzib106G0944 Durio zibethinus HOM05D000092 ORTHO05D000042 9.7e-06 54.3 111 33.3
QL03p032375 Quercus lobata HOM05D000092 ORTHO05D000042 9.7e-06 54.3 113 32.7
Sed0005138 Sechium edule HOM05D000092 ORTHO05D000042 9.7e-06 54.3 83 41.0
Thecc.K0003900 Theobroma cacao HOM05D000092 ORTHO05D000042 9.7e-06 54.3 112 34.8


User provided reference genes

Program Settings