Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g07920 Coffea canephora HOM05D005125 ORTHO05D006777 1.3e-93 346.3 166 100.0
Cc10_g00670 Coffea canephora HOM05D005125 ORTHO05D006777 3.3e-44 182.2 156 65.4
GSVIVG01013360001 Vitis vinifera HOM05D005125 ORTHO05D006777 6.7e-37 157.9 156 55.8
Dinv05534 Davidia involucrata HOM05D005125 ORTHO05D006777 1.1e-36 157.1 156 58.3
Hma1.2p1_0507F.1_g168460 Hydrangea macrophylla HOM05D005125 ORTHO05D006777 1.9e-36 156.4 156 59.0
Gorai.002G117000 Gossypium raimondii HOM05D005125 ORTHO05D006777 3.3e-36 155.6 156 55.1
CSS0022218 Camellia sinensis var. sinensis HOM05D005125 ORTHO05D006777 5.6e-36 154.8 156 56.4
AUR62036871 Chenopodium quinoa HOM05D005125 ORTHO05D006777 5.6e-36 154.8 156 57.1
Migut.C00961 Erythranthe guttata HOM05D005125 ORTHO05D006777 5.6e-36 154.8 156 56.4
Duzib093G0577 Durio zibethinus HOM05D005125 ORTHO05D006777 7.4e-36 154.5 156 55.1
Gohir.A01G105600 Gossypium hirsutum HOM05D005125 ORTHO05D006777 7.4e-36 154.5 156 54.5
EL10Ac1g01960 Beta vulgaris HOM05D005125 ORTHO05D006777 9.6e-36 154.1 156 55.1
Gohir.D01G091900 Gossypium hirsutum HOM05D005125 ORTHO05D006777 9.6e-36 154.1 156 54.5
Actinidia37922 Actinidia chinensis HOM05D005125 ORTHO05D006777 1.3e-35 153.7 156 56.4
Potri.002G010800 Populus trichocarpa HOM05D005125 ORTHO05D006777 1.6e-35 153.3 156 53.2
Sabra05G0193900 Salix brachista HOM05D005125 ORTHO05D006777 1.6e-35 153.3 156 54.5
vmacro21811 Vaccinium macrocarpon HOM05D005125 ORTHO05D006777 2.1e-35 152.9 162 54.3
Duzib116G0840 Durio zibethinus HOM05D005125 ORTHO05D006777 2.8e-35 152.5 156 54.5
QL02p014036 Quercus lobata HOM05D005125 ORTHO05D006777 3.7e-35 152.1 156 55.1
Sc15g0004430 Simmondsia chinensis HOM05D005125 ORTHO05D006777 3.7e-35 152.1 159 54.1
Haze_22773 Corylus avellana HOM05D005125 ORTHO05D006777 4.8e-35 151.8 156 54.5
Ah.00g000800 Amaranthus hybridus HOM05D005125 ORTHO05D006777 6.2e-35 151.4 156 55.8
FAN20G1306 Fragaria x ananassa HOM05D005125 ORTHO05D006777 6.2e-35 151.4 154 53.9
Rhsim06G0007400 Rhododendron simsii HOM05D005125 ORTHO05D006777 6.2e-35 151.4 156 54.5
vmacro04403 Vaccinium macrocarpon HOM05D005125 ORTHO05D006777 6.2e-35 151.4 169 52.7
Thecc.08G058900 Theobroma cacao HOM05D005125 ORTHO05D006777 8.1e-35 151.0 156 55.1
Cfa014076 Carpinus fangiana HOM05D005125 ORTHO05D006777 1.8e-34 149.8 156 54.5
FAN27G2626 Fragaria x ananassa HOM05D005125 ORTHO05D006777 1.8e-34 149.8 154 53.9
THA.LOC104813172 Tarenaya hassleriana HOM05D005125 ORTHO05D006777 1.8e-34 149.8 156 51.9
Cpa.g.sc26.198 Carica papaya HOM05D005125 ORTHO05D006777 2.4e-34 149.4 156 53.2
FvH4_2g37450 Fragaria vesca HOM05D005125 ORTHO05D006777 2.4e-34 149.4 154 53.2
TWI56G0714 Tripterygium wilfordii HOM05D005125 ORTHO05D006777 2.4e-34 149.4 157 56.1
Potri.005G250300 Populus trichocarpa HOM05D005125 ORTHO05D006777 3.1e-34 149.1 156 53.2
FAN15G0126 Fragaria x ananassa HOM05D005125 ORTHO05D006777 5.3e-34 148.3 153 54.2
Hund05112 Selenicereus undatus HOM05D005125 ORTHO05D006777 5.3e-34 148.3 156 54.5
Dinv31939 Davidia involucrata HOM05D005125 ORTHO05D006777 6.9e-34 147.9 156 53.8
MD08G1002400 Malus domestica HOM05D005125 ORTHO05D006777 6.9e-34 147.9 156 51.9
CiPaw.08G073000 Carya illinoinensis HOM05D005125 ORTHO05D006777 9.0e-34 147.5 157 56.7
Ciclev10003241m.g Citrus clementina HOM05D005125 ORTHO05D006777 9.0e-34 147.5 155 56.1
CiPaw.07G138900 Carya illinoinensis HOM05D005125 ORTHO05D006777 1.2e-33 147.1 131 60.3
Lj4A11T69 Lonicera japonica HOM05D005125 ORTHO05D006777 1.2e-33 147.1 156 54.5
Glyma.06G018200 Glycine max HOM05D005125 ORTHO05D006777 1.5e-33 146.7 161 53.4
Medtr3g115290 Medicago truncatula HOM05D005125 ORTHO05D006777 1.5e-33 146.7 156 53.2
Prupe.1G354500 Prunus persica HOM05D005125 ORTHO05D006777 1.5e-33 146.7 156 51.3
Ca_15433_v3 Cicer arietinum L. HOM05D005125 ORTHO05D006777 2.6e-33 146.0 156 52.6
Ca_15458_v3 Cicer arietinum L. HOM05D005125 ORTHO05D006777 2.6e-33 146.0 156 52.6
TPR.G38202 Trifolium pratense HOM05D005125 ORTHO05D006777 2.6e-33 146.0 156 52.6
MD15G1002000 Malus domestica HOM05D005125 ORTHO05D006777 3.4e-33 145.6 156 51.9
Psat5g159120 Pisum sativum HOM05D005125 ORTHO05D006777 3.4e-33 145.6 156 51.3
Glyma.04G017900 Glycine max HOM05D005125 ORTHO05D006777 4.5e-33 145.2 161 52.8
Manes.05G134400 Manihot esculenta HOM05D005125 ORTHO05D006777 4.5e-33 145.2 156 51.9
Rhsim07G0254900 Rhododendron simsii HOM05D005125 ORTHO05D006777 7.6e-33 144.4 156 54.5
CARHR284930 Cardamine hirsuta HOM05D005125 ORTHO05D006777 1.0e-32 144.1 156 51.9
RcHm_v2.0_Chr6g0304271 Rosa chinensis HOM05D005125 ORTHO05D006777 1.0e-32 144.1 156 51.9
SalBow7G1095 Salvia bowleyana HOM05D005125 ORTHO05D006777 1.0e-32 144.1 170 51.8
CAN.G311.115 Capsicum annuum HOM05D005125 ORTHO05D006777 1.3e-32 143.7 167 54.5
Eucgr.E03516 Eucalyptus grandis HOM05D005125 ORTHO05D006777 1.3e-32 143.7 156 53.8
PGR083G1107 Punica granatum HOM05D005125 ORTHO05D006777 1.3e-32 143.7 156 53.8
Sed0024407 Sechium edule HOM05D005125 ORTHO05D006777 1.3e-32 143.7 156 51.9
AL8G19280 Arabidopsis lyrata HOM05D005125 ORTHO05D006777 2.2e-32 142.9 156 51.3
Eucgr.L00923 Eucalyptus grandis HOM05D005125 ORTHO05D006777 2.2e-32 142.9 157 52.9
Lj1g0005535 Lotus japonicus HOM05D005125 ORTHO05D006777 2.2e-32 142.9 157 51.6
CANSAT25G1708 Cannabis sativa HOM05D005125 ORTHO05D006777 3.8e-32 142.1 156 51.9
Duzib041G0467 Durio zibethinus HOM05D005125 ORTHO05D006777 3.8e-32 142.1 156 52.6
Solyc04g082340.3 Solanum lycopersicum HOM05D005125 ORTHO05D006777 3.8e-32 142.1 156 55.1
Sopen04g035960 Solanum pennellii HOM05D005125 ORTHO05D006777 3.8e-32 142.1 156 55.1
Aa31LG9G12440 Aethionema arabicum HOM05D005125 ORTHO05D006777 4.9e-32 141.7 166 50.0
ECA238G0848 Erigeron canadensis HOM05D005125 ORTHO05D006777 4.9e-32 141.7 156 51.3
Atru.chr13.135 Acer truncatum HOM05D005125 ORTHO05D006777 6.5e-32 141.4 156 52.6
Actinidia28601 Actinidia chinensis HOM05D005125 ORTHO05D006777 6.5e-32 141.4 187 46.0
BcaB07g31085 Brassica carinata HOM05D005125 ORTHO05D006777 6.5e-32 141.4 158 51.3
PGSC0003DMG400009979 Solanum tuberosum HOM05D005125 ORTHO05D006777 6.5e-32 141.4 154 55.2
Carub.0008s0686 Capsella rubella HOM05D005125 ORTHO05D006777 8.4e-32 141.0 156 50.6
Sp7g08250 Schrenkiella parvula HOM05D005125 ORTHO05D006777 8.4e-32 141.0 156 50.6
unitig_747.g21516 Utricularia gibba HOM05D005125 ORTHO05D006777 8.4e-32 141.0 156 50.6
VMungo1309G1587 Vigna mungo HOM05D005125 ORTHO05D006777 8.4e-32 141.0 157 54.1
Lsat_1_v5_gn_2_5181 Lactuca sativa HOM05D005125 ORTHO05D006777 1.1e-31 140.6 156 51.3
TAR625G0173 Trochodendron aralioides HOM05D005125 ORTHO05D006777 1.1e-31 140.6 155 54.2
AT5G42320 Arabidopsis thaliana HOM05D005125 ORTHO05D006777 1.4e-31 140.2 156 51.3
Lalb_Chr11g0061631 Lupinus albus HOM05D005125 ORTHO05D006777 1.4e-31 140.2 131 58.0
Thhalv10027780m.g Eutrema salsugineum HOM05D005125 ORTHO05D006777 1.9e-31 139.8 137 54.0
SGA_v2.0_scaffold108G30863 Striga asiatica HOM05D005125 ORTHO05D006777 1.9e-31 139.8 145 53.8
Lalb_Chr23g0265791 Lupinus albus HOM05D005125 ORTHO05D006777 2.5e-31 139.4 157 52.9
MELO3C026539.2 Cucumis melo HOM05D005125 ORTHO05D006777 4.2e-31 138.7 154 51.3
Manes.18G005400 Manihot esculenta HOM05D005125 ORTHO05D006777 4.2e-31 138.7 131 58.0
Phvul.009G010800 Phaseolus vulgaris HOM05D005125 ORTHO05D006777 4.2e-31 138.7 131 58.0
ClCG08G009440 Citrullus lanatus HOM05D005125 ORTHO05D006777 5.5e-31 138.3 155 52.9
BcaC04g22006 Brassica carinata HOM05D005125 ORTHO05D006777 7.1e-31 137.9 158 50.6
C09p24930 Brassica napus HOM05D005125 ORTHO05D006777 7.1e-31 137.9 158 50.6
BraA09t37570Z Brassica rapa HOM05D005125 ORTHO05D006777 7.1e-31 137.9 158 51.3
arahy.Tifrunner.gnm1.ann1.1X7ZBM Arachis hypogaea HOM05D005125 ORTHO05D006777 1.2e-30 137.1 167 52.1
arahy.Tifrunner.gnm1.ann1.VXG7Z6 Arachis hypogaea HOM05D005125 ORTHO05D006777 1.2e-30 137.1 167 52.1
A09p19570 Brassica napus HOM05D005125 ORTHO05D006777 1.2e-30 137.1 158 51.3
Nn5g30942 Nelumbo nucifera HOM05D005125 ORTHO05D006777 1.2e-30 137.1 154 51.9
PSO541G3228 Papaver somniferum HOM05D005125 ORTHO05D006777 1.2e-30 137.1 131 56.5
PSO675G8084 Papaver somniferum HOM05D005125 ORTHO05D006777 1.6e-30 136.7 131 56.5
EL10Ac7g16836 Beta vulgaris HOM05D005125 ORTHO05D006777 2.1e-30 136.3 146 54.1
CsaV3_6G031580 Cucumis sativus L. HOM05D005125 ORTHO05D006777 2.7e-30 136.0 131 56.5
Peaxi162Scf00893g00037 Petunia axillaris HOM05D005125 ORTHO05D006777 4.6e-30 135.2 149 55.7
Aqoxy6G01728 Aquilegia oxysepala HOM05D005125 ORTHO05D006777 6.0e-30 134.8 154 50.6
Nitab4.5_0000588g0110 Nicotiana tabacum HOM05D005125 ORTHO05D006777 2.3e-29 132.9 149 55.0
HanXRQChr06g0183991 Helianthus annuus HOM05D005125 ORTHO05D006777 3.9e-29 132.1 156 48.1
SHI07997 Sapria himalayana HOM05D005125 ORTHO05D006777 5.1e-29 131.7 158 48.7
MD12G1003300 Malus domestica HOM05D005125 ORTHO05D006777 6.7e-29 131.3 165 47.3
ATR0661G305 Amborella trichopoda HOM05D005125 ORTHO05D006777 2.1e-27 126.3 141 49.6
Gohir.D05G182800 Gossypium hirsutum HOM05D005125 ORTHO05D006777 4.8e-27 125.2 129 52.7
MBI08_g41521_MAGBIO Magnolia biondii HOM05D005125 ORTHO05D006777 4.8e-27 125.2 178 43.3
Gorai.009G188100 Gossypium raimondii HOM05D005125 ORTHO05D006777 8.2e-27 124.4 129 52.7
SGA_v2.0_scaffold83G26467 Striga asiatica HOM05D005125 ORTHO05D006777 1.4e-26 123.6 125 53.6
DCAR_016769 Daucus carota HOM05D005125 ORTHO05D006777 3.1e-26 122.5 150 46.7
Gohir.A05G179600 Gossypium hirsutum HOM05D005125 ORTHO05D006777 5.3e-26 121.7 127 52.8
Os02g0119300 Oryza sativa ssp. japonica HOM05D005125 ORTHO05D006777 6.9e-26 121.3 131 52.7
CDE05G1644 Ceratophyllum demersum HOM05D005125 ORTHO05D006777 9.0e-26 120.9 154 47.4
Lsat_1_v5_gn_8_26201 Lactuca sativa HOM05D005125 ORTHO05D006777 1.2e-25 120.6 156 45.5
Zm00001eb209310 Zea mays HOM05D005125 ORTHO05D006777 7.6e-25 117.9 131 50.4
BcaNung05255 Brassica carinata HOM05D005125 ORTHO05D006777 3.8e-24 115.5 160 45.6
SEGI_03459 Sequoiadendron giganteum HOM05D005125 ORTHO05D006777 3.8e-24 115.5 132 49.2
HPP92_007117 Vanilla planifolia HOM05D005125 ORTHO05D006777 1.8e-21 106.7 155 45.8
CSS0019336 Camellia sinensis var. sinensis HOM05D005125 ORTHO05D006777 8.7e-21 104.4 101 56.4
Mapoly0045s0063 Marchantia polymorpha HOM05D005125 ORTHO05D006777 9.7e-20 100.9 131 43.5
SMO358G0159 Selaginella moellendorffii HOM05D005125 ORTHO05D006777 1.3e-19 100.5 131 42.0
Pp3c20_16570 Physcomitrium patens HOM05D005125 ORTHO05D006777 8.2e-19 97.8 163 38.7
AagrBONN_evm.TU.Sc2ySwM_362.2863 Anthoceros agrestis HOM05D005125 ORTHO05D006777 3.1e-18 95.9 137 41.6
Oeu056206.2 Olea europaea HOM05D005125 ORTHO05D006777 1.4e-15 87.0 79 59.5
Cre11.g467631 Chlamydomonas reinhardtii HOM05D005125 ORTHO05D006777 2.1e-14 83.2 173 32.4
COL.COLO4_06662 Corchorus olitorius HOM05D005125 ORTHO05D006777 3.6e-14 82.4 75 57.3
ECA238G3411 Erigeron canadensis HOM05D005125 ORTHO05D006777 6.1e-14 81.6 91 50.5
PRCOL_00006814 Prasinoderma coloniale HOM05D005125 ORTHO05D006777 1.1e-12 77.4 131 36.6
BolC9t55384H Brassica oleracea HOM05D005125 ORTHO05D006777 1.3e-11 73.9 81 53.1
Lsat_1_v5_gn_1_87521 Lactuca sativa HOM05D005125 ORTHO05D007904 2.0e-09 66.6 47 61.7
Cc10_g14360 Coffea canephora HOM05D005125 ORTHO05D006777 2.9e-08 62.8 33 84.8


User provided reference genes

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