Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.4e-40 168.3 82 100.0
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.5e-29 132.5 73 83.6
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 3.3e-29 131.3 79 82.3
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.8e-28 128.3 78 79.5
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.8e-28 128.3 78 78.2
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 6.2e-28 127.1 65 89.2
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 6.2e-28 127.1 65 89.2
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 8.1e-28 126.7 74 81.1
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 4.0e-27 124.4 74 79.7
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 4.0e-27 124.4 78 79.5
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 5.3e-27 124.0 74 79.7
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 9.0e-27 123.2 69 84.1
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.2e-26 122.9 74 81.1
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.2e-26 122.9 74 81.1
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.5e-26 122.5 74 79.7
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.5e-26 122.5 74 78.4
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 2.0e-26 122.1 78 73.1
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 3.4e-26 121.3 69 82.6
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 3.4e-26 121.3 65 84.6
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 4.5e-26 120.9 75 77.3
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 4.5e-26 120.9 74 78.4
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 4.5e-26 120.9 73 76.7
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 4.5e-26 120.9 75 77.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.5e-26 120.9 80 72.5
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 7.6e-26 120.2 68 82.4
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 9.9e-26 119.8 76 77.6
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.3e-25 119.4 78 74.4
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.7e-25 119.0 74 75.7
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.7e-25 119.0 80 75.0
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 6.4e-25 117.1 64 82.8
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 6.4e-25 117.1 74 74.3
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 1.1e-24 116.3 78 75.6
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.1e-24 116.3 64 84.4
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 2.4e-24 115.2 64 82.8
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 2.4e-24 115.2 64 81.2
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 2.4e-24 115.2 70 80.0
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 3.2e-24 114.8 64 81.2
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.2e-24 114.8 70 77.1
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.2e-24 114.4 64 82.8
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.2e-24 114.4 70 75.7
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 4.2e-24 114.4 64 81.2
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 5.4e-24 114.0 64 79.7
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 5.4e-24 114.0 78 74.4
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 7.1e-24 113.6 68 80.9
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 7.1e-24 113.6 69 76.8
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 7.1e-24 113.6 75 73.3
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 9.3e-24 113.2 64 78.1
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.2e-23 112.8 64 79.7
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.2e-23 112.8 63 82.5
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.2e-23 112.8 77 71.4
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.6e-23 112.5 68 77.9
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.1e-23 112.1 64 81.2
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.1e-23 112.1 59 84.7
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.1e-23 112.1 56 91.1
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 2.1e-23 112.1 64 82.8
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.7e-23 111.7 71 77.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.7e-23 111.7 64 81.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 2.7e-23 111.7 64 81.2
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 3.5e-23 111.3 68 79.4
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 4.6e-23 110.9 64 79.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 6.0e-23 110.5 56 87.5
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 6.0e-23 110.5 68 76.5
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 7.9e-23 110.2 72 70.8
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 1.0e-22 109.8 57 86.0
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.0e-22 109.8 77 64.9
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.3e-22 109.4 78 70.5
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 2.3e-22 108.6 58 84.5
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.3e-22 108.6 73 71.2
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 8.7e-22 106.7 64 78.1
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 8.7e-22 106.7 78 64.1
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.5e-21 105.9 73 65.8
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.9e-21 105.5 64 79.7
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.9e-21 105.5 57 84.2
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.9e-21 105.5 59 76.3
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 2.5e-21 105.1 86 64.0
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 4.3e-21 104.4 70 72.9
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.3e-21 104.4 55 85.5
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 4.3e-21 104.4 56 85.7
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 5.6e-21 104.0 56 80.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.3e-20 102.8 57 82.5
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 4.8e-20 100.9 55 83.6
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 8.1e-20 100.1 72 65.3
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 8.1e-20 100.1 70 68.6
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.8e-19 99.0 58 75.9
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 6.9e-19 97.1 72 65.3
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 3.0e-14 81.6 45 77.8
Cc07_g21190 Coffea canephora HOM05D007563 ORTHO05D009546 2.5e-13 78.6 40 97.5
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.8e-11 72.4 79 49.4
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 1.8e-11 72.4 43 69.8
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 9.0e-11 70.1 69 49.3
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 8.4e-09 63.5 49 61.2
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.1e-08 63.2 42 66.7
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.4e-08 62.8 41 61.0


User provided reference genes

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