Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g06490 Coffea canephora HOM05D001865 ORTHO05D001815 2.2e-89 332.4 188 100.0
Cc07_g01610 Coffea canephora HOM05D001865 ORTHO05D001815 9.5e-56 220.7 171 83.6
Cc00_g27930 Coffea canephora HOM05D001865 ORTHO05D001815 1.0e-54 217.2 177 72.3
Cc00_g27100 Coffea canephora HOM05D001865 ORTHO05D001815 2.0e-53 213.0 162 74.1
Cfa007363 Carpinus fangiana HOM05D001865 ORTHO05D001815 5.2e-30 135.2 171 48.5
QL02p074384 Quercus lobata HOM05D001865 ORTHO05D001815 5.2e-30 135.2 169 47.9
QL02p074394 Quercus lobata HOM05D001865 ORTHO05D001815 2.7e-26 122.9 169 45.0
Haze_14747 Corylus avellana HOM05D001865 ORTHO05D001815 1.3e-25 120.6 170 45.3
Sopen02g016960 Solanum pennellii HOM05D001865 ORTHO05D001815 2.3e-25 119.8 170 42.4
TAR629G1615 Trochodendron aralioides HOM05D001865 ORTHO05D001815 3.9e-25 119.0 170 42.4
Solyc02g067850.2 Solanum lycopersicum HOM05D001865 ORTHO05D001815 1.1e-24 117.5 172 43.0
PGSC0003DMG400006960 Solanum tuberosum HOM05D001865 ORTHO05D001815 1.1e-24 117.5 170 41.8
MD17G1026200 Malus domestica HOM05D001865 ORTHO05D001815 1.5e-24 117.1 170 42.4
Oeu041354.1 Olea europaea HOM05D001865 ORTHO05D001815 3.3e-24 115.9 167 46.1
Oeu048613.1 Olea europaea HOM05D001865 ORTHO05D001815 3.3e-24 115.9 171 50.9
Prupe.3G292500 Prunus persica HOM05D001865 ORTHO05D001815 6.2e-23 111.7 169 49.7
SGA_v2.0_scaffold135G34909 Striga asiatica HOM05D001865 ORTHO05D001815 1.4e-22 110.5 174 43.7
CAN.G1057.6 Capsicum annuum HOM05D001865 ORTHO05D001815 2.4e-22 109.8 170 48.2
Sc16g0003200 Simmondsia chinensis HOM05D001865 ORTHO05D001815 3.1e-22 109.4 170 40.6
Nitab4.5_0012657g0010 Nicotiana tabacum HOM05D001865 ORTHO05D001815 3.4e-21 105.9 173 48.0
Nitab4.5_0002529g0040 Nicotiana tabacum HOM05D001865 ORTHO05D001815 7.6e-21 104.8 176 38.6
FAN02G1059 Fragaria x ananassa HOM05D001865 ORTHO05D001815 3.8e-20 102.4 175 38.3
FAN09G2294 Fragaria x ananassa HOM05D001865 ORTHO05D001815 4.9e-20 102.1 175 36.6
Migut.K01399 Erythranthe guttata HOM05D001865 ORTHO05D001815 6.4e-20 101.7 172 41.9
Eucgr.J02251 Eucalyptus grandis HOM05D001865 ORTHO05D001815 2.4e-19 99.8 174 39.1
unitig_744.g24359 Utricularia gibba HOM05D001865 ORTHO05D001815 4.2e-19 99.0 165 44.2
HanXRQChr09g0255231 Helianthus annuus HOM05D001865 ORTHO05D001815 1.3e-17 94.0 172 42.4
CSS0050411 Camellia sinensis var. sinensis HOM05D001865 ORTHO05D001815 2.3e-17 93.2 184 44.0
CiPaw.03G044300 Carya illinoinensis HOM05D001865 ORTHO05D001815 2.3e-17 93.2 172 38.4
Manes.15G151300 Manihot esculenta HOM05D001865 ORTHO05D001815 5.1e-17 92.0 177 39.0
CSS0034863 Camellia sinensis var. sinensis HOM05D001865 ORTHO05D001815 1.5e-16 90.5 185 43.2
Cpa.g.sc108.72 Carica papaya HOM05D001865 ORTHO05D001815 4.3e-16 89.0 109 55.0
PGR083G2467 Punica granatum HOM05D001865 ORTHO05D001815 3.6e-15 85.9 187 35.3
Hund17346 Selenicereus undatus HOM05D001865 ORTHO05D001815 3.6e-15 85.9 170 40.0
Atru.chr6.2405 Acer truncatum HOM05D001865 ORTHO05D001815 6.2e-15 85.1 172 37.2
Actinidia36117 Actinidia chinensis HOM05D001865 ORTHO05D001815 1.4e-14 84.0 110 45.5
TWI36G1586 Tripterygium wilfordii HOM05D001865 ORTHO05D001815 2.4e-14 83.2 170 33.5
ECA232G1609 Erigeron canadensis HOM05D001865 ORTHO05D001815 3.1e-14 82.8 174 39.1
ECA240G1335 Erigeron canadensis HOM05D001865 ORTHO05D001815 3.1e-14 82.8 170 38.8
Peaxi162Scf00080g01217 Petunia axillaris HOM05D001865 ORTHO05D001815 4.5e-13 79.0 174 40.2
Eucgr.J02194 Eucalyptus grandis HOM05D001865 ORTHO05D001815 9.9e-13 77.8 113 45.1
Eucgr.J02196 Eucalyptus grandis HOM05D001865 ORTHO05D001815 9.9e-13 77.8 113 45.1
Dinv25732 Davidia involucrata HOM05D001865 ORTHO05D001815 2.2e-12 76.6 169 33.7
Hma1.2p1_0999F.1_g246110 Hydrangea macrophylla HOM05D001865 ORTHO05D001815 4.9e-12 75.5 167 34.1
Ciclev10017819m.g Citrus clementina HOM05D001865 ORTHO05D001815 1.1e-11 74.3 171 33.3
Lsat_1_v5_gn_4_184081 Lactuca sativa HOM05D001865 ORTHO05D001815 1.4e-11 73.9 162 38.9
Thecc.04G018100 Theobroma cacao HOM05D001865 ORTHO05D001815 2.4e-11 73.2 171 34.5
SalBow7G3687 Salvia bowleyana HOM05D001865 ORTHO05D001815 5.4e-11 72.0 174 35.1
Duzib147G1297 Durio zibethinus HOM05D001865 ORTHO05D001815 7.1e-11 71.6 169 33.7
Potri.001G344200 Populus trichocarpa HOM05D001865 ORTHO05D001815 9.3e-11 71.2 170 33.5
Lju41A42T105 Lonicera japonica HOM05D001865 ORTHO05D001815 1.6e-10 70.5 171 33.9
Cc05_g02020 Coffea canephora HOM05D001865 ORTHO05D001815 3.5e-10 69.3 180 32.8
Actinidia05990 Actinidia chinensis HOM05D001865 ORTHO05D001815 6.0e-10 68.6 164 35.4
Gohir.A07G223500 Gossypium hirsutum HOM05D001865 ORTHO05D001815 6.0e-10 68.6 171 34.5
Gohir.D07G230200 Gossypium hirsutum HOM05D001865 ORTHO05D001815 6.0e-10 68.6 171 33.9
Gorai.001G265500 Gossypium raimondii HOM05D001865 ORTHO05D001815 6.0e-10 68.6 171 33.9
Glyma.05G003300 Glycine max HOM05D001865 ORTHO05D001815 3.9e-09 65.9 170 41.2
CSS0002483 Camellia sinensis var. sinensis HOM05D001865 ORTHO05D001815 1.1e-08 64.3 110 40.0
CSS0007019 Camellia sinensis var. sinensis HOM05D001865 ORTHO05D001815 1.1e-08 64.3 110 40.0
GSVIVG01032397001 Vitis vinifera HOM05D001865 ORTHO05D001815 1.5e-08 63.9 171 31.6
TWI18G0602 Tripterygium wilfordii HOM05D001865 ORTHO05D001815 4.3e-08 62.4 108 38.0
Lj2g0006866 Lotus japonicus HOM05D001865 ORTHO05D001815 5.6e-08 62.0 157 32.5
Duzib133G0666 Durio zibethinus HOM05D001865 ORTHO05D001815 7.4e-08 61.6 159 35.8
Rhsim06G0178600 Rhododendron simsii HOM05D001865 ORTHO05D001815 2.1e-07 60.1 114 37.7
Ciclev10015636m.g Citrus clementina HOM05D001865 ORTHO05D001815 4.8e-07 58.9 108 37.0
Hma1.2p1_0599F.1_g186990 Hydrangea macrophylla HOM05D001865 ORTHO05D001815 4.8e-07 58.9 117 37.6
Nn4g22622 Nelumbo nucifera HOM05D001865 ORTHO05D001815 1.4e-06 57.4 176 36.9
Migut.C01132 Erythranthe guttata HOM05D001865 ORTHO05D001815 3.1e-06 56.2 171 33.3
THA.LOC104808836 Tarenaya hassleriana HOM05D001865 ORTHO05D001815 3.1e-06 56.2 111 38.7
Oeu036995.1 Olea europaea HOM05D001865 ORTHO05D001815 9.0e-06 54.7 171 31.0


User provided reference genes

Program Settings