Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g06350 Coffea canephora HOM05D003819 ORTHO05D023588 1.6e-106 389.4 193 100.0
Cc05_g08390 Coffea canephora HOM05D003819 ORTHO05D005291 5.2e-25 118.6 171 46.8
Cc00_g28410 Coffea canephora HOM05D003819 ORTHO05D005291 1.2e-24 117.5 171 46.2
Cc02_g34240 Coffea canephora HOM05D003819 ORTHO05D023588 1.5e-19 100.5 44 100.0
Actinidia11157 Actinidia chinensis HOM05D003819 ORTHO05D005291 4.6e-13 79.0 173 37.6
Nitab4.5_0006875g0030 Nicotiana tabacum HOM05D003819 ORTHO05D005291 7.8e-13 78.2 168 36.3
Peaxi162Scf00384g00211 Petunia axillaris HOM05D003819 ORTHO05D005291 3.0e-12 76.3 170 35.3
Nitab4.5_0000249g0240 Nicotiana tabacum HOM05D003819 ORTHO05D005291 6.6e-12 75.1 170 35.9
Peaxi162Scf00469g00034 Petunia axillaris HOM05D003819 ORTHO05D005291 1.9e-11 73.6 174 34.5
Sopen12g006260 Solanum pennellii HOM05D003819 ORTHO05D005291 2.1e-10 70.1 170 33.5
PGSC0003DMG400007856 Solanum tuberosum HOM05D003819 ORTHO05D005291 2.1e-10 70.1 170 33.5
Nitab4.5_0013227g0010 Nicotiana tabacum HOM05D003819 ORTHO05D005291 3.6e-10 69.3 170 34.7
Rhsim06G0130800 Rhododendron simsii HOM05D003819 ORTHO05D005291 3.6e-10 69.3 171 33.3
Solyc12g010900.1 Solanum lycopersicum HOM05D003819 ORTHO05D005291 3.6e-10 69.3 168 33.3
Actinidia10955 Actinidia chinensis HOM05D003819 ORTHO05D005291 8.1e-10 68.2 171 32.7
CAN.G1081.14 Capsicum annuum HOM05D003819 ORTHO05D005291 8.1e-10 68.2 169 36.1
CAN.G1148.8 Capsicum annuum HOM05D003819 ORTHO05D005291 3.1e-09 66.2 168 30.4
Lj1P684T13 Lonicera japonica HOM05D003819 ORTHO05D005291 1.5e-08 63.9 169 34.9
GSVIVG01020711001 Vitis vinifera HOM05D003819 ORTHO05D005291 1.5e-08 63.9 168 35.1
TAR629G3160 Trochodendron aralioides HOM05D003819 ORTHO05D005291 2.0e-08 63.5 169 34.3
vmacro12379 Vaccinium macrocarpon HOM05D003819 ORTHO05D005291 7.6e-08 61.6 165 32.1
Migut.M00265 Erythranthe guttata HOM05D003819 ORTHO05D005291 9.9e-08 61.2 169 35.5
Glyma.12G128600 Glycine max HOM05D003819 ORTHO05D005291 9.9e-08 61.2 176 31.8
Potri.014G142600 Populus trichocarpa HOM05D003819 ORTHO05D005291 8.4e-07 58.2 167 32.3
COL.COLO4_33586 Corchorus olitorius HOM05D003819 ORTHO05D005291 1.1e-06 57.8 166 32.5
Dinv07714 Davidia involucrata HOM05D003819 ORTHO05D005291 2.4e-06 56.6 178 32.6
Glyma.06G277000 Glycine max HOM05D003819 ORTHO05D005291 5.4e-06 55.5 168 32.1
Haze_13379 Corylus avellana HOM05D003819 ORTHO05D005291 7.1e-06 55.1 168 32.7
Gohir.D12G091900 Gossypium hirsutum HOM05D003819 ORTHO05D005291 9.2e-06 54.7 169 31.4


User provided reference genes

Program Settings