Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g05150 Coffea canephora HOM05D005802 ORTHO05D006992 9.6e-65 250.0 124 100.0
Cc00_g05160 Coffea canephora HOM05D005802 ORTHO05D006992 3.1e-55 218.4 127 90.6
Cc02_g24280 Coffea canephora HOM05D005802 ORTHO05D006992 1.0e-34 150.2 111 75.7
Lsat_1_v5_gn_4_44621 Lactuca sativa HOM05D005802 ORTHO05D006992 7.2e-28 127.5 111 64.0
Gohir.A12G094400 Gossypium hirsutum HOM05D005802 ORTHO05D006992 1.6e-27 126.3 111 64.9
CSS0000774 Camellia sinensis var. sinensis HOM05D005802 ORTHO05D006992 2.1e-27 125.9 111 63.1
Gorai.008G105800 Gossypium raimondii HOM05D005802 ORTHO05D006992 2.7e-27 125.6 111 64.0
Gohir.D12G097200 Gossypium hirsutum HOM05D005802 ORTHO05D006992 3.6e-27 125.2 111 63.1
DCAR_025098 Daucus carota HOM05D005802 ORTHO05D006992 6.1e-27 124.4 110 61.8
vmacro21028 Vaccinium macrocarpon HOM05D005802 ORTHO05D006992 6.1e-27 124.4 111 64.9
Actinidia12678 Actinidia chinensis HOM05D005802 ORTHO05D006992 1.0e-26 123.6 111 64.0
Actinidia28320 Actinidia chinensis HOM05D005802 ORTHO05D006992 1.0e-26 123.6 111 64.0
COL.COLO4_12497 Corchorus olitorius HOM05D005802 ORTHO05D006992 1.0e-26 123.6 111 63.1
Oeu051926.1 Olea europaea HOM05D005802 ORTHO05D006992 1.8e-26 122.9 111 64.0
Rhsim01G0150000 Rhododendron simsii HOM05D005802 ORTHO05D006992 3.0e-26 122.1 113 62.8
GSVIVG01027639001 Vitis vinifera HOM05D005802 ORTHO05D006992 4.0e-26 121.7 111 63.1
TAR375G0251 Trochodendron aralioides HOM05D005802 ORTHO05D006992 5.2e-26 121.3 110 63.6
TAR375G0577 Trochodendron aralioides HOM05D005802 ORTHO05D006992 5.2e-26 121.3 110 63.6
MSTRG.17165 Avicennia marina HOM05D005802 ORTHO05D006992 8.8e-26 120.6 110 63.6
Potri.014G060000 Populus trichocarpa HOM05D005802 ORTHO05D006992 1.1e-25 120.2 111 61.3
Nn6g34003 Nelumbo nucifera HOM05D005802 ORTHO05D006992 2.0e-25 119.4 111 61.3
Ciclev10021687m.g Citrus clementina HOM05D005802 ORTHO05D006992 2.6e-25 119.0 111 61.3
PSO017G7043 Papaver somniferum HOM05D005802 ORTHO05D006992 2.6e-25 119.0 111 61.3
PSO478G1061 Papaver somniferum HOM05D005802 ORTHO05D006992 2.6e-25 119.0 111 61.3
QL04p039160 Quercus lobata HOM05D005802 ORTHO05D006992 2.6e-25 119.0 111 61.3
Peaxi162Scf01052g00014 Petunia axillaris HOM05D005802 ORTHO05D006992 3.3e-25 118.6 110 60.0
PGR042G3152 Punica granatum HOM05D005802 ORTHO05D006992 3.3e-25 118.6 110 60.9
Sabra14G0043900 Salix brachista HOM05D005802 ORTHO05D006992 3.3e-25 118.6 120 56.7
Duzib133G1160 Durio zibethinus HOM05D005802 ORTHO05D006992 4.4e-25 118.2 111 60.4
Manes.05G048500 Manihot esculenta HOM05D005802 ORTHO05D006992 5.7e-25 117.9 111 60.4
CAN.G106.25 Capsicum annuum HOM05D005802 ORTHO05D006992 7.5e-25 117.5 111 58.6
CiPaw.13G033000 Carya illinoinensis HOM05D005802 ORTHO05D006992 7.5e-25 117.5 111 59.5
Thecc.01G381900 Theobroma cacao HOM05D005802 ORTHO05D006992 7.5e-25 117.5 111 61.3
HanXRQChr03g0088101 Helianthus annuus HOM05D005802 ORTHO05D006992 9.7e-25 117.1 110 59.1
Aqoxy7G00743 Aquilegia oxysepala HOM05D005802 ORTHO05D006992 1.3e-24 116.7 111 59.5
Cpa.g.sc49.162 Carica papaya HOM05D005802 ORTHO05D006992 1.3e-24 116.7 110 60.9
ECA234G0875 Erigeron canadensis HOM05D005802 ORTHO05D006992 1.3e-24 116.7 110 59.1
Sc02g0002770 Simmondsia chinensis HOM05D005802 ORTHO05D006992 1.3e-24 116.7 111 60.4
Solyc05g050900.4 Solanum lycopersicum HOM05D005802 ORTHO05D006992 1.3e-24 116.7 110 58.2
Sopen05g029380 Solanum pennellii HOM05D005802 ORTHO05D006992 1.3e-24 116.7 110 58.2
PGSC0003DMG400007022 Solanum tuberosum HOM05D005802 ORTHO05D006992 1.3e-24 116.7 110 58.2
FAN10G3200 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.7e-24 116.3 116 58.6
CANSAT56G0664 Cannabis sativa HOM05D005802 ORTHO05D006992 2.8e-24 115.5 110 59.1
Cfa011175 Carpinus fangiana HOM05D005802 ORTHO05D006992 3.7e-24 115.2 111 59.5
Lalb_Chr12g0208021 Lupinus albus HOM05D005802 ORTHO05D006992 3.7e-24 115.2 110 59.1
EL10Ac1g00841 Beta vulgaris HOM05D005802 ORTHO05D006992 4.8e-24 114.8 111 58.6
AUR62013665 Chenopodium quinoa HOM05D005802 ORTHO05D006992 4.8e-24 114.8 110 59.1
TWI23G1076 Tripterygium wilfordii HOM05D005802 ORTHO05D006992 4.8e-24 114.8 110 59.1
Migut.B01600 Erythranthe guttata HOM05D005802 ORTHO05D006992 8.2e-24 114.0 112 59.8
AUR62004168 Chenopodium quinoa HOM05D005802 ORTHO05D006992 1.1e-23 113.6 110 58.2
RcHm_v2.0_Chr5g0028911 Rosa chinensis HOM05D005802 ORTHO05D006992 1.1e-23 113.6 110 59.1
arahy.Tifrunner.gnm1.ann1.I9SF1K Arachis hypogaea HOM05D005802 ORTHO05D006992 1.4e-23 113.2 110 57.3
ClCG09G008930 Citrullus lanatus HOM05D005802 ORTHO05D006992 1.4e-23 113.2 110 57.3
Sed0027573 Sechium edule HOM05D005802 ORTHO05D006992 1.4e-23 113.2 110 57.3
Lj3g0015572 Lotus japonicus HOM05D005802 ORTHO05D006992 1.8e-23 112.8 110 58.2
ATR1153G072 Amborella trichopoda HOM05D005802 ORTHO05D006992 3.1e-23 112.1 111 58.6
FAN10G1300 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.1e-23 112.1 116 57.8
CDE04G3422 Ceratophyllum demersum HOM05D005802 ORTHO05D006992 4.1e-23 111.7 124 54.0
Medtr4g026180 Medicago truncatula HOM05D005802 ORTHO05D006992 4.1e-23 111.7 110 57.3
SalBow5G5068 Salvia bowleyana HOM05D005802 ORTHO05D006992 4.1e-23 111.7 110 58.2
CsaV3_7G026130 Cucumis sativus L. HOM05D005802 ORTHO05D006992 5.3e-23 111.3 110 58.2
FAN03G1851 Fragaria x ananassa HOM05D005802 ORTHO05D006992 5.3e-23 111.3 116 56.9
Os07g0484500 Oryza sativa ssp. japonica HOM05D005802 ORTHO05D006992 5.3e-23 111.3 111 56.8
Glyma.01G137000 Glycine max HOM05D005802 ORTHO05D006992 7.0e-23 110.9 110 57.3
Atru.chr5.259 Acer truncatum HOM05D005802 ORTHO05D006992 9.1e-23 110.5 111 57.7
Eucgr.D02489 Eucalyptus grandis HOM05D005802 ORTHO05D006992 9.1e-23 110.5 110 58.2
FAN06G3617 Fragaria x ananassa HOM05D005802 ORTHO05D006992 9.1e-23 110.5 116 56.9
Hund27376 Selenicereus undatus HOM05D005802 ORTHO05D006992 9.1e-23 110.5 111 55.9
Thhalv10006164m.g Eutrema salsugineum HOM05D005802 ORTHO05D006992 1.2e-22 110.2 111 58.6
Phvul.010G077700 Phaseolus vulgaris HOM05D005802 ORTHO05D006992 1.2e-22 110.2 110 57.3
Haze_02673 Corylus avellana HOM05D005802 ORTHO05D006992 2.7e-22 109.0 116 56.9
FAN03G0906 Fragaria x ananassa HOM05D005802 ORTHO05D006992 2.7e-22 109.0 118 56.8
Nitab4.5_0005050g0030 Nicotiana tabacum HOM05D005802 ORTHO05D006992 2.7e-22 109.0 107 56.1
BraA09t40717Z Brassica rapa HOM05D005802 ORTHO05D006992 3.5e-22 108.6 112 58.0
THA.LOC104802463 Tarenaya hassleriana HOM05D005802 ORTHO05D006992 3.5e-22 108.6 110 56.4
BcaC07g40584 Brassica carinata HOM05D005802 ORTHO05D006992 4.5e-22 108.2 112 57.1
A09p52850 Brassica napus HOM05D005802 ORTHO05D006992 4.5e-22 108.2 112 58.0
AL5G42970 Arabidopsis lyrata HOM05D005802 ORTHO05D006992 5.9e-22 107.8 110 57.3
AT3G60660 Arabidopsis thaliana HOM05D005802 ORTHO05D006992 5.9e-22 107.8 110 57.3
CARHR171060 Cardamine hirsuta HOM05D005802 ORTHO05D006992 5.9e-22 107.8 110 57.3
Sp5g02580 Schrenkiella parvula HOM05D005802 ORTHO05D006992 5.9e-22 107.8 110 57.3
MD02G1209900 Malus domestica HOM05D005802 ORTHO05D006992 7.7e-22 107.5 109 57.8
Psat7g217800 Pisum sativum HOM05D005802 ORTHO05D006992 7.7e-22 107.5 110 55.5
FAN03G0348 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.0e-21 107.1 116 56.0
C08p35600 Brassica napus HOM05D005802 ORTHO05D006992 1.3e-21 106.7 112 57.1
BolC8t51149H Brassica oleracea HOM05D005802 ORTHO05D006992 1.3e-21 106.7 112 57.1
TPR.G5024 Trifolium pratense HOM05D005802 ORTHO05D006992 2.2e-21 105.9 110 53.6
arahy.Tifrunner.gnm1.ann1.GQKS8P Arachis hypogaea HOM05D005802 ORTHO05D006992 2.9e-21 105.5 142 45.8
Prupe.2G138600 Prunus persica HOM05D005802 ORTHO05D006992 3.8e-21 105.1 109 55.0
RcHm_v2.0_Chr1g0349231 Rosa chinensis HOM05D005802 ORTHO05D006992 3.8e-21 105.1 116 57.8
Aa31LG10G14950 Aethionema arabicum HOM05D005802 ORTHO05D006992 5.0e-21 104.8 110 55.5
Ah.05g173880 Amaranthus hybridus HOM05D005802 ORTHO05D006992 5.0e-21 104.8 110 54.5
FAN01G2984 Fragaria x ananassa HOM05D005802 ORTHO05D006992 6.5e-21 104.4 127 54.3
FAN06G1875 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.5e-21 104.0 127 53.5
Zm00001eb321530 Zea mays HOM05D005802 ORTHO05D006992 1.5e-20 103.2 109 56.9
Carub.0005s2750 Capsella rubella HOM05D005802 ORTHO05D006992 7.2e-20 100.9 122 51.6
Nitab4.5_0001329g0060 Nicotiana tabacum HOM05D005802 ORTHO05D006992 9.4e-20 100.5 102 54.9
Carub.0005s2739 Capsella rubella HOM05D005802 ORTHO05D006992 2.7e-19 99.0 102 57.8
Dinv44124 Davidia involucrata HOM05D005802 ORTHO05D006992 6.1e-19 97.8 99 57.6
AagrBONN_evm.TU.Sc2ySwM_368.1567 Anthoceros agrestis HOM05D005802 ORTHO05D006992 3.4e-17 92.0 109 47.7
SMO347G0664 Selaginella moellendorffii HOM05D005802 ORTHO05D006992 3.4e-17 92.0 108 49.1
Lj7A534G38 Lonicera japonica HOM05D000908 ORTHO05D000789 2.2e-16 89.4 85 57.6
Oeu051925.1 Olea europaea HOM05D005802 ORTHO05D006992 1.8e-15 86.3 86 59.3
Pp3c6_12030 Physcomitrium patens HOM05D005802 ORTHO05D006992 2.4e-15 85.9 109 47.7
Actinidia33479 Actinidia chinensis HOM05D005802 ORTHO05D006992 5.4e-15 84.7 94 53.2
Mapoly0010s0189 Marchantia polymorpha HOM05D005802 ORTHO05D006992 7.0e-15 84.3 110 45.5
SGA_v2.0_scaffold153G36973 Striga asiatica HOM05D005802 ORTHO05D006992 2.0e-14 82.8 115 47.0
Ca_02431_v3 Cicer arietinum L. HOM05D005802 ORTHO05D006992 2.7e-14 82.4 83 55.4
SHI22578 Sapria himalayana HOM05D005802 ORTHO05D006992 7.7e-14 80.9 102 45.1
FvH4_7g11150 Fragaria vesca HOM05D005802 ORTHO05D006992 1.3e-13 80.1 84 54.8
VMungo0331G0187 Vigna mungo HOM05D005802 ORTHO05D006992 2.9e-13 79.0 85 51.8
RcHm_v2.0_Chr1g0349251 Rosa chinensis HOM05D005802 ORTHO05D006992 6.5e-13 77.8 91 49.5
Glyma.03G031466 Glycine max HOM05D005802 ORTHO05D006992 3.2e-12 75.5 83 50.6
RcHm_v2.0_Chr1g0349201 Rosa chinensis HOM05D005802 ORTHO05D006992 9.4e-12 73.9 108 43.5
C04p32020 Brassica napus HOM05D010895 ORTHO05D012939 3.0e-10 68.9 105 45.7
BolC4t24754H Brassica oleracea HOM05D005802 ORTHO05D006992 3.0e-10 68.9 105 45.7
RcHm_v2.0_Chr1g0349171 Rosa chinensis HOM05D005802 ORTHO05D006992 4.9e-08 61.6 50 68.0
FAN10G4230 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.3e-08 60.8 44 65.9
CBR_g48776 Chara braunii HOM05D005802 ORTHO05D006992 5.4e-07 58.2 87 43.7


User provided reference genes

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