Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 2.4e-70 268.9 147 100.0
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 5.1e-57 224.6 147 85.0
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 1.9e-56 222.6 147 76.2
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 3.3e-56 221.9 147 78.2
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 3.3e-56 221.9 147 81.6
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 7.4e-56 220.7 143 84.6
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.3e-55 219.9 147 77.6
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.7e-55 219.5 143 76.9
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 1.7e-55 219.5 143 78.3
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 4.8e-55 218.0 143 79.0
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 6.3e-55 217.6 147 75.5
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 6.3e-55 217.6 147 74.1
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 8.2e-55 217.2 143 77.6
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.4e-54 216.5 143 85.3
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 1.4e-54 216.5 143 78.3
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.8e-54 216.1 143 78.3
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 2.4e-54 215.7 147 77.6
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 2.4e-54 215.7 147 77.6
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 4.1e-54 214.9 143 77.6
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 4.1e-54 214.9 143 81.1
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.3e-54 214.5 147 76.9
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 5.3e-54 214.5 147 75.5
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 6.9e-54 214.2 147 73.5
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 6.9e-54 214.2 147 73.5
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 1.2e-53 213.4 147 74.1
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 1.5e-53 213.0 143 76.2
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 1.5e-53 213.0 143 76.2
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.5e-53 213.0 144 77.8
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 2.6e-53 212.2 147 73.5
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 3.4e-53 211.8 147 79.6
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 3.4e-53 211.8 143 74.8
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 4.5e-53 211.5 135 80.7
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 4.5e-53 211.5 130 82.3
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 5.9e-53 211.1 147 72.1
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 7.7e-53 210.7 147 79.6
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 7.7e-53 210.7 147 72.1
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 7.7e-53 210.7 147 83.0
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 7.7e-53 210.7 146 76.7
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 1.0e-52 210.3 146 76.0
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 1.0e-52 210.3 143 74.1
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.3e-52 209.9 147 73.5
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.7e-52 209.5 147 74.1
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.2e-52 209.1 145 76.6
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 2.2e-52 209.1 146 74.7
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.2e-52 209.1 143 80.4
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 5.0e-52 208.0 135 78.5
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 8.5e-52 207.2 144 81.2
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 1.1e-51 206.8 149 74.5
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 1.1e-51 206.8 149 74.5
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 1.1e-51 206.8 149 74.5
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 1.1e-51 206.8 110 91.8
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 1.4e-51 206.5 116 86.2
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 2.5e-51 205.7 147 72.1
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 2.5e-51 205.7 111 89.2
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 2.5e-51 205.7 143 73.4
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 3.2e-51 205.3 147 74.8
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 3.2e-51 205.3 147 74.8
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 3.2e-51 205.3 147 73.5
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 4.2e-51 204.9 143 74.8
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.2e-51 204.9 116 87.9
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 4.2e-51 204.9 148 75.0
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 5.5e-51 204.5 147 72.1
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 5.5e-51 204.5 147 72.1
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 7.2e-51 204.1 147 72.1
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 9.4e-51 203.8 147 73.5
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 9.4e-51 203.8 147 74.1
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 1.2e-50 203.4 152 75.0
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 72.8
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 72.8
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 1.6e-50 203.0 141 74.5
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 1.6e-50 203.0 141 74.5
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 1.6e-50 203.0 147 72.8
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.6e-50 203.0 147 74.1
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 1.6e-50 203.0 141 73.8
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 2.1e-50 202.6 143 73.4
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 2.1e-50 202.6 147 71.4
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 2.7e-50 202.2 145 73.8
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 2.7e-50 202.2 140 75.0
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 2.7e-50 202.2 144 77.8
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 3.6e-50 201.8 148 71.6
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.7e-50 201.4 147 76.2
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 4.7e-50 201.4 147 70.7
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 4.7e-50 201.4 147 75.5
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 4.7e-50 201.4 147 70.7
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 6.1e-50 201.1 116 84.5
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 6.1e-50 201.1 143 73.4
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 6.1e-50 201.1 147 70.1
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 7.9e-50 200.7 116 85.3
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 7.9e-50 200.7 147 71.4
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 1.0e-49 200.3 143 72.7
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 1.0e-49 200.3 143 74.1
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.0e-49 200.3 139 74.8
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.0e-49 200.3 113 85.8
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 1.8e-49 199.5 139 74.8
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 2.3e-49 199.1 113 85.8
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 2.3e-49 199.1 116 84.5
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 3.0e-49 198.7 144 79.9
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.0e-49 198.7 139 74.1
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 3.9e-49 198.4 143 79.0
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 3.9e-49 198.4 143 79.0
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 5.1e-49 198.0 147 72.8
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 6.7e-49 197.6 148 71.6
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 8.8e-49 197.2 142 74.6
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 1.1e-48 196.8 148 69.6
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.5e-48 196.4 147 78.2
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.5e-48 196.4 143 78.3
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.0e-48 196.1 147 70.1
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 2.0e-48 196.1 147 71.4
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.6e-48 195.7 137 74.5
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 4.4e-48 194.9 147 72.8
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 7.4e-48 194.1 106 88.7
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 2.8e-47 192.2 143 70.6
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 1.8e-46 189.5 148 73.6
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 5.3e-46 188.0 168 60.7
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 5.3e-46 188.0 147 70.1
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 7.0e-46 187.6 113 82.3
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 1.2e-45 186.8 167 62.3
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 1.5e-45 186.4 136 70.6
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.5e-45 186.4 174 60.3
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 7.7e-45 184.1 112 92.9
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 1.0e-44 183.7 109 81.7
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.5e-43 179.1 208 55.3
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 3.0e-41 172.2 112 82.1
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 3.3e-40 168.7 96 87.5
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 1.1e-38 163.7 90 90.0
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 1.4e-38 163.3 92 88.0
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 1.8e-38 162.9 91 89.0
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 2.6e-37 159.1 88 88.6
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 1.3e-36 156.8 109 73.4
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 3.8e-36 155.2 107 74.8
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 9.7e-32 140.6 101 77.2
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 7.0e-30 134.4 108 59.3
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 2.0e-29 132.9 108 61.1
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.9e-29 131.3 149 59.7
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 1.7e-23 113.2 63 92.1
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 8.3e-23 110.9 108 54.6
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.6e-21 106.7 60 90.0
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 2.3e-20 102.8 89 61.8
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 1.5e-19 100.1 86 54.7
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 1.9e-19 99.8 73 64.4
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 5.2e-17 91.7 113 48.7
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 8.3e-15 84.3 120 42.5
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 3.3e-11 72.4 87 41.4
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.6e-10 70.1 63 57.1
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 6.1e-10 68.2 49 69.4
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 1.4e-09 67.0 35 91.4
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 9.8e-08 60.8 58 56.9
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 2.2e-07 59.7 70 47.1
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 4.9e-07 58.5 98 40.8
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 8.3e-07 57.8 80 41.2
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 3.2e-06 55.8 29 82.8


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