Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g03100 Coffea canephora HOM05D001172 ORTHO05D001128 1.9e-23 111.7 58 100.0
Cc07_g11290 Coffea canephora HOM05D001172 ORTHO05D001128 2.3e-16 88.2 46 97.8
Rhsim10G0206300 Rhododendron simsii HOM05D001172 ORTHO05D001128 5.8e-12 73.6 55 70.9
Nitab4.5_0008809g0040 Nicotiana tabacum HOM05D001172 ORTHO05D001128 2.2e-11 71.6 58 69.0
CSS0005429 Camellia sinensis var. sinensis HOM05D001172 ORTHO05D001128 2.9e-11 71.2 50 78.0
CSS0008804 Camellia sinensis var. sinensis HOM05D001172 ORTHO05D001128 2.9e-11 71.2 50 78.0
Hma1.2p1_0013F.1_g008210 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 2.9e-11 71.2 57 71.9
Actinidia17408 Actinidia chinensis HOM05D001172 ORTHO05D001128 7.1e-10 66.6 47 76.6
Dinv08550 Davidia involucrata HOM05D001172 ORTHO05D001128 1.2e-09 65.9 45 77.8
Nitab4.5_0001561g0100 Nicotiana tabacum HOM05D001172 ORTHO05D001128 1.6e-09 65.5 56 67.9
vmacro18439 Vaccinium macrocarpon HOM05D001172 ORTHO05D001128 6.0e-09 63.5 55 65.5
Dinv40143 Davidia involucrata HOM05D000041 ORTHO05D010141 7.8e-09 63.2 47 74.5
Nitab4.5_0001685g0030 Nicotiana tabacum HOM05D001172 ORTHO05D001128 1.0e-08 62.8 56 64.3
CSS0041529 Camellia sinensis var. sinensis HOM05D001172 ORTHO05D001128 1.3e-08 62.4 48 70.8
Lj4A225T62 Lonicera japonica HOM05D001172 ORTHO05D001128 1.7e-08 62.0 48 72.9
Nitab4.5_0000188g0240 Nicotiana tabacum HOM05D001172 ORTHO05D001128 1.7e-08 62.0 58 63.8
DCAR_011579 Daucus carota HOM05D001172 ORTHO05D001128 3.0e-08 61.2 48 72.9
Oeu020657.1 Olea europaea HOM05D001172 ORTHO05D001128 8.6e-08 59.7 47 66.0
Hma1.2p1_0561F.1_g178980 Hydrangea macrophylla HOM05D001172 ORTHO05D001128 1.1e-07 59.3 45 66.7
Actinidia28731 Actinidia chinensis HOM05D001172 ORTHO05D001128 1.5e-07 58.9 48 68.8
Lsat_1_v5_gn_2_75500 Lactuca sativa HOM05D001172 ORTHO05D001128 1.5e-07 58.9 46 69.6
MSTRG.15585 Avicennia marina HOM05D001172 ORTHO05D001128 2.5e-07 58.2 55 58.2
ECA246G1521 Erigeron canadensis HOM05D001172 ORTHO05D001128 4.3e-07 57.4 55 58.2
Lj2A484T46 Lonicera japonica HOM05D001172 ORTHO05D001128 5.6e-07 57.0 48 70.8
SGA_v2.0_scaffold45G17088 Striga asiatica HOM05D001172 ORTHO05D001128 1.2e-06 55.8 59 55.9
Lsat_1_v5_gn_4_144221 Lactuca sativa HOM05D001172 ORTHO05D001128 2.1e-06 55.1 51 64.7
vmacro22206 Vaccinium macrocarpon HOM05D001172 ORTHO05D001128 2.1e-06 55.1 47 63.8
GSVIVG01005189001 Vitis vinifera HOM05D001172 ORTHO05D001128 2.8e-06 54.7 46 67.4
PGSC0003DMG400003661 Solanum tuberosum HOM05D001172 ORTHO05D001128 4.7e-06 53.9 44 68.2
MD02G1123800 Malus domestica HOM05D001172 ORTHO05D001128 6.2e-06 53.5 50 56.0
Nitab4.5_0002105g0040 Nicotiana tabacum HOM05D001172 ORTHO05D001128 6.2e-06 53.5 49 63.3
Sopen02g028180 Solanum pennellii HOM05D001172 ORTHO05D001128 6.2e-06 53.5 45 64.4
Solyc02g083400.3 Solanum lycopersicum HOM05D001172 ORTHO05D001128 8.1e-06 53.1 45 64.4
SGA_v2.0_scaffold229G43293 Striga asiatica HOM05D001172 ORTHO05D001128 8.1e-06 53.1 52 59.6


User provided reference genes

Program Settings