Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 4.2e-98 361.3 177 100.0
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.2e-39 167.2 142 60.6
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 2.6e-39 166.0 136 66.2
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.7e-38 163.3 109 74.3
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 4.9e-38 161.8 107 71.0
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 6.4e-38 161.4 98 78.6
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.1e-37 160.6 124 68.5
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.4e-37 160.2 98 78.6
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 3.2e-37 159.1 109 71.6
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 5.4e-37 158.3 133 60.9
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 7.1e-37 157.9 98 77.6
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 7.1e-37 157.9 133 63.2
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 7.1e-37 157.9 100 77.0
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 2.1e-36 156.4 113 70.8
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 3.5e-36 155.6 128 62.5
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 3.5e-36 155.6 99 75.8
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 3.5e-36 155.6 127 64.6
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 6.0e-36 154.8 101 73.3
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 6.0e-36 154.8 109 68.8
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 7.9e-36 154.5 98 75.5
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 7.9e-36 154.5 85 85.9
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 1.3e-35 153.7 99 81.8
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.3e-35 153.7 138 61.6
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 3.0e-35 152.5 86 83.7
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 3.9e-35 152.1 106 68.9
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.9e-35 152.1 118 66.9
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 3.9e-35 152.1 103 74.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 5.1e-35 151.8 98 76.5
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 6.6e-35 151.4 94 76.6
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 8.7e-35 151.0 90 75.6
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 1.1e-34 150.6 105 68.6
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.5e-34 150.2 128 60.9
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.9e-34 149.8 138 58.0
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.9e-34 149.8 138 58.0
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.9e-34 149.8 138 58.0
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.9e-34 149.8 99 72.7
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.5e-34 149.4 114 69.3
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.5e-34 149.4 130 63.1
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.5e-34 149.4 106 69.8
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 3.3e-34 149.1 107 70.1
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 4.3e-34 148.7 137 57.7
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 4.3e-34 148.7 101 74.3
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.3e-34 148.7 128 60.2
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.3e-33 147.1 97 75.3
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.6e-33 146.7 109 66.1
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 1.6e-33 146.7 97 75.3
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 2.1e-33 146.4 123 61.8
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 2.1e-33 146.4 123 61.8
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 2.1e-33 146.4 83 81.9
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 2.1e-33 146.4 128 60.9
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 2.8e-33 146.0 117 62.4
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 2.8e-33 146.0 138 56.5
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 2.8e-33 146.0 96 72.9
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 2.8e-33 146.0 138 56.5
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 2.8e-33 146.0 85 81.2
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 4.8e-33 145.2 117 61.5
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 4.8e-33 145.2 127 61.4
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 4.8e-33 145.2 134 59.7
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 6.2e-33 144.8 117 63.2
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 6.2e-33 144.8 96 72.9
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 6.2e-33 144.8 99 71.7
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 6.2e-33 144.8 86 81.4
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.1e-32 144.1 85 77.6
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.1e-32 144.1 76 88.2
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.1e-32 144.1 109 65.1
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.4e-32 143.7 100 71.0
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.4e-32 143.7 100 71.0
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.4e-32 143.7 94 72.3
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 1.8e-32 143.3 124 57.3
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 1.8e-32 143.3 127 59.1
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.8e-32 143.3 112 64.3
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 2.4e-32 142.9 85 77.6
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 2.4e-32 142.9 111 63.1
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 3.1e-32 142.5 85 77.6
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 3.1e-32 142.5 99 70.7
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 3.1e-32 142.5 86 75.6
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 9.0e-32 141.0 151 51.7
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 9.0e-32 141.0 97 69.1
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 1.5e-31 140.2 85 80.0
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 3.4e-31 139.0 122 63.1
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 5.8e-31 138.3 85 78.8
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 1.3e-30 137.1 77 84.4
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.7e-30 136.7 98 71.4
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.7e-30 136.7 93 71.0
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.2e-30 136.3 85 75.3
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 2.2e-30 136.3 127 59.1
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.1e-29 134.0 132 56.1
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.1e-29 134.0 77 83.1
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.9e-29 133.3 98 70.4
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 2.4e-29 132.9 111 62.2
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.2e-29 132.1 80 77.5
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 5.1e-27 125.2 66 86.4
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 5.1e-27 125.2 97 66.0
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 2.8e-25 119.4 122 50.0
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.7e-25 119.0 112 58.0
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 4.8e-25 118.6 119 52.1
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.4e-24 117.1 63 85.7
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.4e-21 107.1 75 65.3
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.2e-21 105.9 75 69.3
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 5.5e-21 105.1 86 60.5
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 7.9e-20 101.3 98 59.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.8e-17 92.0 48 85.4
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 2.0e-15 86.7 101 52.5
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 2.2e-14 83.2 70 64.3
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 6.5e-14 81.6 85 52.9
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 5.9e-07 58.5 77 49.4


User provided reference genes

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