Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 6.6e-173 610.5 291 100.0
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 2.4e-138 495.7 247 96.0
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 2.2e-115 419.5 247 76.5
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 3.7e-115 418.7 247 77.7
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 8.5e-112 407.5 247 75.3
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 2.5e-111 406.0 256 73.4
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 2.5e-111 406.0 247 74.9
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 3.2e-111 405.6 247 74.9
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 1.2e-110 403.7 247 74.9
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 7.9e-110 401.0 247 73.3
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 7.9e-110 401.0 247 72.9
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 6.7e-109 397.9 256 70.7
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 2.5e-108 396.0 247 73.3
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 3.3e-108 395.6 247 71.7
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 3.3e-108 395.6 256 70.7
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 5.7e-108 394.8 256 70.3
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 9.7e-108 394.0 261 69.7
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 1.7e-107 393.3 256 70.3
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 2.2e-107 392.9 247 72.5
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 2.8e-107 392.5 263 68.4
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 2.8e-107 392.5 247 70.9
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 2.8e-107 392.5 247 70.0
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 4.8e-107 391.7 247 71.7
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 2.4e-106 389.4 247 70.4
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 4.1e-106 388.7 243 73.3
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 4.1e-106 388.7 243 72.4
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 4.1e-106 388.7 243 72.4
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 6.9e-106 387.9 242 74.0
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 1.2e-105 387.1 247 70.9
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 5.9e-105 384.8 248 69.8
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 5.0e-104 381.7 247 69.2
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 6.5e-104 381.3 248 69.4
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 6.5e-104 381.3 247 69.2
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.9e-103 379.8 247 69.6
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 5.5e-103 378.3 248 69.0
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 5.5e-103 378.3 248 69.4
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 9.4e-103 377.5 243 71.6
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 1.2e-102 377.1 274 66.1
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 2.7e-102 375.9 248 67.7
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 5.1e-101 371.7 248 67.7
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 8.8e-101 370.9 249 67.5
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.1e-100 370.5 249 67.5
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 2.0e-100 369.8 249 68.3
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 9.7e-100 367.5 247 66.8
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 1.7e-99 366.7 248 67.3
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 2.9e-96 355.9 249 66.3
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 6.5e-96 354.8 243 69.1
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 5.5e-95 351.7 244 63.5
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 6.7e-93 344.7 249 65.1
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 5.7e-92 341.7 224 70.1
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 7.4e-92 341.3 249 64.7
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 7.4e-92 341.3 249 64.7
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 1.7e-91 340.1 249 64.7
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 1.7e-91 340.1 249 64.3
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 1.7e-91 340.1 249 64.7
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 3.7e-91 339.0 247 62.3
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 8.2e-91 337.8 248 63.7
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 1.4e-90 337.0 247 61.9
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 3.1e-90 335.9 248 62.9
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 4.1e-90 335.5 247 59.9
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 4.1e-90 335.5 249 63.5
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 4.5e-89 332.0 249 62.7
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 1.2e-86 323.9 243 64.6
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 3.6e-86 322.4 209 68.9
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 3.0e-85 319.3 243 58.8
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 1.5e-84 317.0 218 67.4
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 1.7e-83 313.5 250 60.0
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 2.2e-83 313.2 236 62.7
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.4e-82 309.7 233 59.2
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 5.0e-56 222.2 245 46.1
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 6.6e-56 221.9 249 47.0
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 6.8e-53 211.8 170 60.0
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 6.0e-49 198.7 157 63.1
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 1.8e-45 187.2 252 38.5
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 7.3e-39 165.2 259 36.3
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 7.8e-33 145.2 108 61.1
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 6.4e-27 125.6 150 46.0
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 2.1e-25 120.6 106 54.7


User provided reference genes

Program Settings