Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g02750 Coffea canephora HOM05D000445 ORTHO05D000314 6.4e-54 213.8 104 100.0
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 3.4e-07 58.5 56 53.6
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.4e-07 58.5 52 55.8
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.4e-07 58.5 52 55.8
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 3.4e-07 58.5 52 55.8
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 5.9e-07 57.8 52 55.8
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 7.7e-07 57.4 88 37.5
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.0e-06 57.0 52 53.8
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.0e-06 57.0 52 53.8
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr00c0349g0573981 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-06 56.6 52 55.8
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.7e-06 56.2 52 53.8
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.7e-06 56.2 52 53.8
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.7e-06 56.2 52 53.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.2e-06 55.8 52 53.8
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.2e-06 55.8 52 53.8
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 2.2e-06 55.8 52 53.8
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-06 55.5 52 53.8
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-06 55.5 52 53.8
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 3.8e-06 55.1 52 53.8
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 5.0e-06 54.7 52 51.9
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 5.0e-06 54.7 52 51.9
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BolSC29t60617H Brassica oleracea HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BolSC47t61073H Brassica oleracea HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 6.5e-06 54.3 52 53.8
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 8.5e-06 53.9 52 51.9
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 8.5e-06 53.9 52 51.9
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 8.5e-06 53.9 52 53.8


User provided reference genes

Program Settings