Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g02160 Coffea canephora HOM05D000101 ORTHO05D014079 6.6e-135 484.2 272 100.0
Cc00_g02070 Coffea canephora HOM05D000101 ORTHO05D014079 2.4e-31 140.2 122 64.8
MSTRG.4462 Avicennia marina HOM05D000101 ORTHO05D014079 6.9e-15 85.5 96 47.9
MSTRG.4460 Avicennia marina HOM05D000101 ORTHO05D014079 1.5e-14 84.3 96 46.9
MSTRG.4470 Avicennia marina HOM05D000101 ORTHO05D000089 5.8e-14 82.4 101 41.6
Cc00_g02130 Coffea canephora HOM05D000101 ORTHO05D000089 8.4e-13 78.6 117 41.9
Cc00_g09490 Coffea canephora HOM05D000101 ORTHO05D000089 1.4e-12 77.8 117 41.0
Cc00_g29590 Coffea canephora HOM05D000101 ORTHO05D000089 2.4e-12 77.0 127 39.4
Cc05_g02440 Coffea canephora HOM05D000101 ORTHO05D000089 5.5e-12 75.9 126 41.3
Cc05_g05250 Coffea canephora HOM05D000101 ORTHO05D000089 5.5e-12 75.9 117 41.9
Cc05_g04690 Coffea canephora HOM05D000101 ORTHO05D000089 7.1e-12 75.5 127 38.6
Migut.D01705 Erythranthe guttata HOM05D000101 ORTHO05D000089 7.1e-12 75.5 99 40.4
SalBow1G6976 Salvia bowleyana HOM05D000101 ORTHO05D014079 9.3e-12 75.1 118 33.1
MSTRG.4476 Avicennia marina HOM05D000101 ORTHO05D014079 1.2e-11 74.7 115 36.5
Migut.D01700 Erythranthe guttata HOM05D000101 ORTHO05D000089 1.6e-11 74.3 97 40.2
Migut.D01702 Erythranthe guttata HOM05D000101 ORTHO05D000089 2.7e-11 73.6 100 40.0
Cc00_g02150 Coffea canephora HOM05D000101 ORTHO05D000089 1.0e-10 71.6 96 43.8
Cc05_g02150 Coffea canephora HOM05D000101 ORTHO05D000089 1.8e-10 70.9 119 41.2
Solyc10g076440.1 Solanum lycopersicum HOM05D000101 ORTHO05D000089 5.1e-10 69.3 102 35.3
Migut.D01655 Erythranthe guttata HOM05D000101 ORTHO05D000089 1.1e-09 68.2 115 36.5
SalBow7G0315 Salvia bowleyana HOM05D000101 ORTHO05D000089 1.5e-09 67.8 118 32.2
Cc00_g02120 Coffea canephora HOM05D000101 ORTHO05D000089 4.3e-09 66.2 127 37.8
Cc00_g09480 Coffea canephora HOM05D000101 ORTHO05D000089 5.6e-09 65.9 119 37.0
Cc00_g02090 Coffea canephora HOM05D000101 ORTHO05D014079 7.4e-09 65.5 119 37.8
Cc00_g02040 Coffea canephora HOM05D000101 ORTHO05D000089 9.6e-09 65.1 112 36.6
CAN.G1963.5 Capsicum annuum HOM05D000101 ORTHO05D000089 1.3e-08 64.7 118 34.7
Migut.D01682 Erythranthe guttata HOM05D000101 ORTHO05D000089 1.3e-08 64.7 90 37.8
Oeu062624.1 Olea europaea HOM05D000101 ORTHO05D000089 1.3e-08 64.7 118 30.5
Nitab4.5_0005335g0050 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.1e-08 63.9 102 36.3
Dinv15018 Davidia involucrata HOM05D000101 ORTHO05D000089 3.7e-08 63.2 96 37.5
Cfa020510 Carpinus fangiana HOM05D000101 ORTHO05D000089 1.1e-07 61.6 102 33.3
Dinv15030 Davidia involucrata HOM05D000101 ORTHO05D000089 2.4e-07 60.5 96 36.5
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 4.0e-07 59.7 118 28.0
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 5.3e-07 59.3 122 26.2
Dinv24618 Davidia involucrata HOM05D000101 ORTHO05D000089 6.9e-07 58.9 96 35.4
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 6.9e-07 58.9 96 35.4
CAN.G1661.1 Capsicum annuum HOM05D000101 ORTHO05D000089 9.0e-07 58.5 95 37.9
Dinv04573 Davidia involucrata HOM05D000101 ORTHO05D000089 9.0e-07 58.5 109 36.7
Actinidia19989 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.2e-06 58.2 101 36.6
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 1.5e-06 57.8 118 24.6
Peaxi162Scf00264g00068 Petunia axillaris HOM05D000101 ORTHO05D000089 1.5e-06 57.8 108 34.3
Peaxi162Scf01226g00004 Petunia axillaris HOM05D000101 ORTHO05D000089 1.5e-06 57.8 108 34.3
Peaxi162Scf01226g00019 Petunia axillaris HOM05D000101 ORTHO05D000089 1.5e-06 57.8 108 34.3
Sopen10g028090 Solanum pennellii HOM05D000101 ORTHO05D000089 1.5e-06 57.8 88 36.4
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 2.0e-06 57.4 100 35.0
Actinidia19992 Actinidia chinensis HOM05D000101 ORTHO05D000089 2.6e-06 57.0 95 37.9
Dinv01411 Davidia involucrata HOM05D000101 ORTHO05D000089 2.6e-06 57.0 100 33.0
Dinv24616 Davidia involucrata HOM05D000101 ORTHO05D000089 2.6e-06 57.0 96 35.4
Peaxi162Scf00264g00067 Petunia axillaris HOM05D000101 ORTHO05D000089 3.4e-06 56.6 108 34.3
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 4.5e-06 56.2 100 34.0
Actinidia05167 Actinidia chinensis HOM05D000101 ORTHO05D000089 5.8e-06 55.8 101 34.7
Actinidia05169 Actinidia chinensis HOM05D000101 ORTHO05D000089 5.8e-06 55.8 101 34.7
MBI11_g31295_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 7.6e-06 55.5 105 31.4
Peaxi162Scf00264g00823 Petunia axillaris HOM05D000101 ORTHO05D000089 7.6e-06 55.5 100 33.0


User provided reference genes

Program Settings