Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g02070 Coffea canephora HOM05D000101 ORTHO05D014079 8.1e-78 294.3 226 100.0
Cc00_g02160 Coffea canephora HOM05D000101 ORTHO05D014079 8.8e-32 141.4 122 64.8
Migut.D01705 Erythranthe guttata HOM05D000101 ORTHO05D000089 2.6e-15 86.7 122 38.5
MSTRG.4460 Avicennia marina HOM05D000101 ORTHO05D014079 3.4e-15 86.3 97 45.4
Migut.D01700 Erythranthe guttata HOM05D000101 ORTHO05D000089 4.4e-15 85.9 98 44.9
Cc00_g02130 Coffea canephora HOM05D000101 ORTHO05D000089 5.7e-15 85.5 118 43.2
SalBow1G6976 Salvia bowleyana HOM05D000101 ORTHO05D014079 7.5e-15 85.1 120 37.5
MSTRG.4462 Avicennia marina HOM05D000101 ORTHO05D014079 9.8e-15 84.7 97 45.4
Cc05_g05250 Coffea canephora HOM05D000101 ORTHO05D000089 2.2e-14 83.6 118 43.2
MSTRG.4476 Avicennia marina HOM05D000101 ORTHO05D014079 2.8e-14 83.2 116 42.2
SalBow7G0315 Salvia bowleyana HOM05D000101 ORTHO05D000089 2.8e-14 83.2 100 42.0
MSTRG.4470 Avicennia marina HOM05D000101 ORTHO05D000089 3.1e-13 79.7 99 40.4
Migut.D01702 Erythranthe guttata HOM05D000101 ORTHO05D000089 2.7e-12 76.6 103 39.8
Cc00_g09490 Coffea canephora HOM05D000101 ORTHO05D000089 8.5e-11 71.6 120 35.8
Dinv15030 Davidia involucrata HOM05D000101 ORTHO05D000089 8.5e-11 71.6 113 39.8
SalBow7G0881 Salvia bowleyana HOM05D000101 ORTHO05D000089 8.5e-11 71.6 105 40.0
Migut.D01682 Erythranthe guttata HOM05D000101 ORTHO05D000089 1.1e-10 71.2 91 39.6
Cc00_g02150 Coffea canephora HOM05D000101 ORTHO05D000089 7.2e-10 68.6 106 45.3
Cc00_g09480 Coffea canephora HOM05D000101 ORTHO05D000089 7.2e-10 68.6 120 35.0
CAN.G1661.11 Capsicum annuum HOM05D000101 ORTHO05D014079 1.6e-09 67.4 108 38.9
Cc05_g02440 Coffea canephora HOM05D000101 ORTHO05D000089 1.6e-09 67.4 108 43.5
Solyc10g076440.1 Solanum lycopersicum HOM05D000101 ORTHO05D000089 1.6e-09 67.4 124 29.8
CAN.G1963.5 Capsicum annuum HOM05D000101 ORTHO05D000089 2.1e-09 67.0 119 35.3
Cc00_g29590 Coffea canephora HOM05D000101 ORTHO05D000089 2.1e-09 67.0 99 41.4
Cc00_g02120 Coffea canephora HOM05D000101 ORTHO05D000089 3.6e-09 66.2 119 37.8
Cc05_g04690 Coffea canephora HOM05D000101 ORTHO05D000089 6.1e-09 65.5 99 40.4
CAN.G1661.1 Capsicum annuum HOM05D000101 ORTHO05D000089 8.0e-09 65.1 103 38.8
Cc05_g02150 Coffea canephora HOM05D000101 ORTHO05D000089 1.4e-08 64.3 122 35.2
CAN.G1661.7 Capsicum annuum HOM05D000101 ORTHO05D000089 1.8e-08 63.9 106 37.7
Cc00_g02090 Coffea canephora HOM05D000101 ORTHO05D014079 3.0e-08 63.2 120 34.2
Migut.D01655 Erythranthe guttata HOM05D000101 ORTHO05D000089 3.0e-08 63.2 124 31.5
CAN.G61.3 Capsicum annuum HOM05D000101 ORTHO05D014079 8.8e-08 61.6 107 38.3
Actinidia19992 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.2e-07 61.2 102 37.3
Dinv15018 Davidia involucrata HOM05D000101 ORTHO05D000089 1.2e-07 61.2 100 37.0
Oeu062624.1 Olea europaea HOM05D000101 ORTHO05D000089 1.2e-07 61.2 117 31.6
CAN.G1661.4 Capsicum annuum HOM05D000101 ORTHO05D000089 1.5e-07 60.8 106 37.7
Dinv04573 Davidia involucrata HOM05D000101 ORTHO05D000089 1.5e-07 60.8 126 33.3
CAN.G639.26 Capsicum annuum HOM05D000101 ORTHO05D000089 2.6e-07 60.1 103 35.0
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 4.4e-07 59.3 113 31.0
Dinv01411 Davidia involucrata HOM05D000101 ORTHO05D000089 7.5e-07 58.5 101 33.7
CAN.G1661.8 Capsicum annuum HOM05D000101 ORTHO05D014079 1.3e-06 57.8 98 38.8
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.7e-06 57.4 117 30.8
CSS0008325 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 2.2e-06 57.0 103 35.9
MSTRG.4481 Avicennia marina HOM05D000101 ORTHO05D000089 3.7e-06 56.2 103 35.0
Sopen10g028090 Solanum pennellii HOM05D000101 ORTHO05D000089 4.9e-06 55.8 94 31.9
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 8.3e-06 55.1 101 33.7


User provided reference genes

Program Settings