Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 1.4e-212 742.7 358 100.0
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 6.4e-178 627.5 357 82.9
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 2.0e-163 579.3 357 75.9
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 5.3e-132 474.9 361 64.0
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 2.0e-131 473.0 278 79.1
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-131 472.6 359 60.4
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 2.0e-126 456.4 271 79.3
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 1.4e-124 450.3 373 60.9
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 1.4e-121 440.3 351 58.4
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 2.1e-120 436.4 356 58.1
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 4.7e-120 435.3 353 57.8
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 4.7e-120 435.3 353 57.8
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.4e-119 433.7 350 60.9
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.8e-119 433.3 349 60.2
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.8e-119 433.3 349 60.2
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.8e-119 433.3 349 60.2
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 2.6e-118 429.5 283 73.1
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 1.6e-115 420.2 351 54.1
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 1.7e-114 416.8 358 54.7
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.8e-114 415.6 344 58.7
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 4.1e-108 395.6 334 59.6
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.7e-101 372.5 329 56.2
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.6e-99 367.1 349 53.9
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 1.6e-99 367.1 257 66.5
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.2e-95 352.1 334 53.6
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 2.4e-92 343.2 171 93.6
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 7.0e-92 341.7 195 81.5
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 4.7e-80 302.4 282 52.1
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 3.7e-77 292.7 243 56.4
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 6.4e-77 292.0 259 55.2
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 1.9e-76 290.4 270 53.0
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 1.1e-73 281.2 270 50.0
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.8e-72 276.6 267 52.4
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 8.9e-71 271.6 356 41.3
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 8.9e-71 271.6 356 41.3
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.3e-69 267.7 176 72.2
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 4.3e-65 252.7 270 47.0
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.4e-62 242.7 189 57.7
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 1.2e-59 234.6 151 65.6
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 4.7e-56 222.6 305 39.3
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 8.1e-56 221.9 255 46.3
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.3e-45 188.0 182 53.3
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 2.4e-39 167.2 119 66.4
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 6.4e-37 159.1 113 62.8
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.4e-37 158.7 102 67.6
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.4e-37 158.7 102 67.6
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 2.4e-36 157.1 126 54.8
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 3.2e-36 156.8 148 54.1
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 1.5e-33 147.9 87 83.9
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.3e-33 146.7 94 68.1
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 2.6e-30 137.1 146 50.0
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 3.4e-30 136.7 94 71.3
Lalb_Chr00c21g0405611 Lupinus albus HOM05D004909 ORTHO05D009316 1.0e-29 135.2 116 54.3
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 4.6e-27 126.3 81 64.2
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 6.0e-27 125.9 109 53.2
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 2.5e-25 120.6 153 45.1
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 7.4e-25 119.0 86 65.1
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 2.2e-24 117.5 177 39.5
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 3.7e-24 116.7 62 88.7
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 4.8e-24 116.3 111 58.6
CAN.G26.10 Capsicum annuum HOM05D004909 ORTHO05D009316 1.4e-23 114.8 102 53.9
Oeu013314.1 Olea europaea HOM05D000129 ORTHO05D000144 2.6e-14 84.0 49 73.5
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 2.5e-12 77.4 75 50.7
Peaxi162Scf00625g00036 Petunia axillaris HOM05D002660 ORTHO05D003902 6.1e-11 72.8 60 58.3
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 3.0e-10 70.5 55 50.9
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 2.2e-08 64.3 145 34.5
Oeu022816.1 Olea europaea HOM05D004909 ORTHO05D009316 2.4e-07 60.8 56 42.9
Nitab4.5_0003320g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-06 58.5 75 40.0


User provided reference genes

Program Settings