Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 1.9e-110 402.5 208 100.0
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 2.9e-45 186.0 186 57.0
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 7.5e-38 161.4 189 50.3
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 7.5e-38 161.4 189 50.3
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 7.5e-38 161.4 189 50.3
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 2.6e-30 136.3 175 45.1
Nitab4.5_0000866g0150 Nicotiana tabacum HOM05D003467 ORTHO05D010659 5.8e-22 108.6 110 60.0
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 1.1e-20 104.4 123 52.8
Sc08g0004800 Simmondsia chinensis HOM05D004291 ORTHO05D005620 3.5e-19 99.4 137 48.9
Sopen06g007660 Solanum pennellii HOM05D008609 ORTHO05D014791 8.7e-18 94.7 102 53.9
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 3.3e-17 92.8 170 37.6
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 7.3e-17 91.7 137 43.1
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 5.3e-15 85.5 192 32.8
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 1.5e-14 84.0 123 40.7
unitig_87.g27989 Utricularia gibba HOM05D015862 ORTHO05D010659 1.5e-14 84.0 140 41.4
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 4.5e-14 82.4 123 43.1
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 1.3e-13 80.9 124 36.3
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 2.2e-13 80.1 115 44.3
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.9e-13 79.7 174 35.1
FAN20G1765 Fragaria x ananassa HOM05D009000 ORTHO05D010659 4.9e-13 79.0 107 44.9
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 4.9e-13 79.0 214 33.6
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 4.9e-13 79.0 140 37.9
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 8.4e-13 78.2 149 38.3
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 1.9e-12 77.0 209 34.0
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 3.2e-12 76.3 192 33.9
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 3.2e-12 76.3 223 34.1
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 4.2e-12 75.9 190 35.8
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 9.3e-12 74.7 182 34.6
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.7e-11 73.2 139 39.6
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.7e-11 73.2 139 39.6
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.7e-11 73.2 139 39.6
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.7e-11 73.2 139 39.6
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 2.7e-11 73.2 139 39.6
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 1.0e-10 71.2 215 34.9
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.3e-10 70.9 76 50.0
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 2.3e-10 70.1 215 34.9
Manes.09G035001 Manihot esculenta HOM05D015862 ORTHO05D010659 2.3e-10 70.1 104 37.5
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 2.3e-10 70.1 157 35.0
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 3.0e-10 69.7 140 35.7
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 6.7e-10 68.6 128 36.7
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 8.7e-10 68.2 128 36.7
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 4.3e-09 65.9 155 32.9
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 1.3e-08 64.3 153 39.2
Sopen03g010810 Solanum pennellii HOM05D009000 ORTHO05D010659 1.3e-08 64.3 154 37.7
Peaxi162Scf02507g00003 Petunia axillaris HOM05D015862 ORTHO05D010659 6.2e-08 62.0 121 38.8
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 1.1e-07 61.2 136 33.8
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 1.8e-07 60.5 131 33.6
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 1.8e-07 60.5 146 31.5
Peaxi162Scf01967g00002 Petunia axillaris HOM05D015862 ORTHO05D010659 2.4e-07 60.1 98 41.8
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.0e-07 59.3 164 37.2
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 3.4e-06 56.2 85 43.5
arahy.Tifrunner.gnm1.ann1.LV33NP Arachis hypogaea HOM05D009000 ORTHO05D010659 4.5e-06 55.8 158 32.9
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 7.6e-06 55.1 55 56.4


User provided reference genes

Program Settings