Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 2.6e-247 858.2 419 100.0
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 3.4e-215 751.5 402 91.3
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 6.1e-212 740.7 402 88.8
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.3e-210 734.9 402 88.1
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 5.7e-210 734.2 405 87.7
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.3e-209 733.0 419 85.2
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.3e-209 733.0 402 88.6
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 2.8e-209 731.9 405 85.9
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 4.8e-209 731.1 401 87.8
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 4.8e-209 731.1 401 87.8
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.4e-208 728.8 401 87.8
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.4e-208 728.8 401 87.8
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 3.1e-208 728.4 402 87.1
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 9.1e-208 726.9 401 86.8
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 9.1e-208 726.9 401 86.8
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 9.1e-208 726.9 401 87.3
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 1.2e-207 726.5 401 87.3
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 1.2e-207 726.5 411 85.9
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-207 726.1 401 86.8
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.5e-207 726.1 401 87.0
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 2.0e-207 725.7 401 86.8
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 4.5e-207 724.5 403 86.1
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 5.9e-207 724.2 401 86.8
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 1.0e-206 723.4 399 86.7
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 1.0e-206 723.4 401 86.8
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 1.3e-206 723.0 401 86.3
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 1.7e-206 722.6 402 86.8
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 1.7e-206 722.6 401 86.3
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 2.2e-206 722.2 402 86.6
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 2.2e-206 722.2 400 88.0
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 6.5e-206 720.7 403 86.1
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 6.5e-206 720.7 401 85.8
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 8.5e-206 720.3 403 86.1
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.4e-205 719.5 416 84.4
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.4e-205 719.5 404 85.9
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 5.5e-205 717.6 413 84.5
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 1.2e-204 716.5 405 85.2
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.7e-204 715.3 398 86.9
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 4.7e-204 714.5 406 84.2
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 4.7e-204 714.5 394 87.1
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 1.0e-203 713.4 400 85.5
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 3.9e-203 711.4 381 89.5
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 5.2e-203 711.1 417 84.2
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 8.8e-203 710.3 402 85.1
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 8.8e-203 710.3 399 84.5
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 8.8e-203 710.3 383 87.2
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 1.5e-202 709.5 393 86.8
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 2.6e-202 708.8 388 87.9
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 3.3e-202 708.4 400 85.0
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.3e-201 706.4 409 82.4
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.3e-201 706.4 409 82.4
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 1.7e-201 706.1 403 83.4
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.7e-201 706.1 398 84.7
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 2.2e-201 705.7 409 82.4
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.8e-201 705.3 409 82.2
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.7e-201 704.9 409 82.2
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 3.7e-201 704.9 403 85.9
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 4.8e-201 704.5 393 84.7
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 6.3e-201 704.1 383 88.0
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 8.2e-201 703.7 397 83.1
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 1.4e-200 703.0 399 86.5
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 3.1e-200 701.8 407 83.3
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 1.2e-199 699.9 404 81.2
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 4.5e-199 698.0 402 84.1
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 5.9e-199 697.6 410 81.7
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 7.7e-199 697.2 401 84.8
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 1.3e-198 696.4 403 83.4
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 1.3e-198 696.4 403 83.1
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.7e-198 696.0 399 85.7
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 2.2e-198 695.7 393 85.0
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.5e-197 693.0 404 82.9
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 1.5e-197 693.0 403 82.9
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.5e-197 693.0 394 85.3
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 3.2e-197 691.8 395 84.6
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 3.2e-197 691.8 401 81.8
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 3.2e-197 691.8 403 81.9
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 7.2e-197 690.6 379 86.0
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 2.1e-196 689.1 402 83.1
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 2.7e-196 688.7 400 82.8
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 2.7e-196 688.7 415 80.7
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 3.6e-196 688.3 425 79.5
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 3.6e-196 688.3 422 79.9
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 4.7e-196 688.0 407 81.3
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 4.7e-196 688.0 379 85.5
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 8.0e-196 687.2 400 82.8
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 8.0e-196 687.2 400 82.8
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 8.0e-196 687.2 394 84.5
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 1.4e-195 686.4 400 82.8
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 1.4e-195 686.4 400 82.5
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 1.4e-195 686.4 400 83.2
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 1.8e-195 686.0 402 83.6
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 8.8e-195 683.7 400 82.8
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 8.8e-195 683.7 402 83.1
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 2.0e-194 682.6 386 85.5
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 7.5e-194 680.6 379 85.0
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.7e-193 679.5 400 82.0
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.4e-192 675.6 399 79.7
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 3.1e-192 675.2 378 86.0
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 5.3e-192 674.5 400 80.0
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 1.6e-191 672.9 352 91.5
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 3.5e-191 671.8 400 80.5
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 1.0e-190 670.2 380 85.8
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.8e-190 668.3 400 80.0
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 3.8e-190 668.3 490 69.2
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 8.5e-190 667.2 400 79.2
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.5e-189 666.4 400 79.8
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 2.5e-189 665.6 424 78.8
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 4.2e-189 664.8 400 80.5
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 5.5e-189 664.5 401 78.6
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 7.2e-189 664.1 401 78.8
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 7.2e-189 664.1 385 80.0
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 1.6e-188 662.9 401 78.6
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.6e-188 662.9 400 79.0
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 2.7e-188 662.1 403 78.7
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 2.7e-188 662.1 400 78.8
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 3.6e-188 661.8 398 78.6
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 3.6e-188 661.8 398 78.6
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 6.1e-188 661.0 401 78.6
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 8.0e-188 660.6 401 78.6
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 3.0e-187 658.7 400 78.8
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 3.0e-187 658.7 390 80.5
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 1.2e-186 656.8 433 77.4
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.5e-186 656.4 403 80.9
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.3e-182 643.3 400 79.0
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 9.5e-181 637.1 350 87.4
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 5.7e-178 627.9 340 89.7
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 7.0e-176 620.9 399 75.4
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 4.3e-173 611.7 642 53.3
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 4.9e-169 598.2 346 82.9
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.5e-162 576.6 401 73.6
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 2.6e-162 575.9 420 71.4
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 7.1e-152 541.2 368 68.5
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 4.0e-147 525.4 307 84.4
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 2.4e-144 516.2 403 66.7
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 7.8e-143 511.1 402 65.9
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 5.6e-133 478.4 381 59.6
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.9e-128 463.4 411 62.5
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 1.0e-126 457.6 261 82.0
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 1.1e-117 427.6 350 57.7
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 3.6e-103 379.4 409 48.2
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.5e-98 364.0 378 49.2
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 1.4e-91 340.9 188 88.3
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 2.6e-85 320.1 411 40.9
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 4.5e-74 282.7 386 40.2
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.7e-71 272.7 181 73.5
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.0e-65 255.0 367 36.0
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 9.5e-48 195.3 113 78.8
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 4.6e-42 176.4 109 80.7
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.7e-31 139.8 72 93.1
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 8.4e-20 102.4 105 57.1
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 1.4e-14 85.1 64 62.5
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 5.3e-14 83.2 49 75.5
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.3e-07 62.0 35 77.1


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