Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g00040 Coffea canephora HOM05D007153 ORTHO05D008769 8.3e-97 357.1 185 100.0
Cc05_g10530 Coffea canephora HOM05D007153 ORTHO05D008769 6.2e-76 287.7 216 75.0
Thecc.07G140300 Theobroma cacao HOM05D007153 ORTHO05D008769 2.8e-60 235.7 205 62.0
Eucgr.F01378 Eucalyptus grandis HOM05D007153 ORTHO05D008769 2.4e-59 232.6 213 61.5
COL.COLO4_17448 Corchorus olitorius HOM05D007153 ORTHO05D008769 5.3e-59 231.5 213 59.6
Gohir.D13G155400 Gossypium hirsutum HOM05D007153 ORTHO05D008769 9.0e-59 230.7 209 61.2
Gorai.013G176000 Gossypium raimondii HOM05D007153 ORTHO05D008769 2.0e-58 229.6 209 61.2
Sabra11G0083600 Salix brachista HOM05D007153 ORTHO05D008769 1.0e-57 227.3 224 57.1
Duzib213G0031 Durio zibethinus HOM05D007153 ORTHO05D008769 1.3e-57 226.9 209 60.3
CSS0012595 Camellia sinensis var. sinensis HOM05D007153 ORTHO05D008769 2.9e-57 225.7 211 59.7
PGSC0003DMG400007056 Solanum tuberosum HOM05D007153 ORTHO05D008769 4.9e-57 224.9 209 61.7
Prupe.4G153500 Prunus persica HOM05D007153 ORTHO05D008769 6.5e-57 224.6 213 58.2
Rhsim06G0187600 Rhododendron simsii HOM05D007153 ORTHO05D008769 1.4e-56 223.4 210 60.0
Peaxi162Scf00111g01220 Petunia axillaris HOM05D007153 ORTHO05D008769 1.9e-56 223.0 213 60.6
Solyc07g062030.3 Solanum lycopersicum HOM05D007153 ORTHO05D008769 2.5e-56 222.6 209 61.7
Sopen07g030290 Solanum pennellii HOM05D007153 ORTHO05D008769 2.5e-56 222.6 209 61.7
PSO832G0017 Papaver somniferum HOM05D007153 ORTHO05D008769 3.2e-56 222.2 207 59.4
PGR083G2631 Punica granatum HOM05D007153 ORTHO05D008769 3.2e-56 222.2 210 61.0
FvH4_3g17350 Fragaria vesca HOM05D007153 ORTHO05D008769 7.1e-56 221.1 213 57.3
TWI38G0031 Tripterygium wilfordii HOM05D007153 ORTHO05D008769 7.1e-56 221.1 215 57.7
GSVIVG01014069001 Vitis vinifera HOM05D007153 ORTHO05D008769 1.6e-55 219.9 220 55.9
Migut.H02033 Erythranthe guttata HOM05D007153 ORTHO05D008769 2.1e-55 219.5 214 56.1
FAN25G3240 Fragaria x ananassa HOM05D007153 ORTHO05D008769 2.7e-55 219.2 213 56.8
MD03G1252100 Malus domestica HOM05D007153 ORTHO05D008769 2.7e-55 219.2 205 59.0
MSTRG.14258 Avicennia marina HOM05D007153 ORTHO05D008769 3.5e-55 218.8 214 59.3
vmacro11989 Vaccinium macrocarpon HOM05D007153 ORTHO05D008769 4.6e-55 218.4 209 58.9
PSO063G3995 Papaver somniferum HOM05D007153 ORTHO05D008769 1.8e-54 216.5 206 57.8
Hma1.2p1_0713F.1_g207790 Hydrangea macrophylla HOM05D007153 ORTHO05D008769 2.3e-54 216.1 210 58.6
MD11G1273600 Malus domestica HOM05D007153 ORTHO05D008769 2.3e-54 216.1 202 58.9
Sc03g0010790 Simmondsia chinensis HOM05D007153 ORTHO05D008769 2.3e-54 216.1 209 57.9
CAN.G375.63 Capsicum annuum HOM05D007153 ORTHO05D008769 3.0e-54 215.7 226 58.0
Ciclev10021578m.g Citrus clementina HOM05D007153 ORTHO05D008769 3.0e-54 215.7 214 57.5
RcHm_v2.0_Chr5g0028871 Rosa chinensis HOM05D007153 ORTHO05D008769 3.9e-54 215.3 213 56.3
Lj1A822T45 Lonicera japonica HOM05D007153 ORTHO05D008769 8.7e-54 214.2 210 58.6
Nitab4.5_0003618g0090 Nicotiana tabacum HOM05D007153 ORTHO05D008769 8.7e-54 214.2 203 61.1
DCAR_017582 Daucus carota HOM05D007153 ORTHO05D008769 1.9e-53 213.0 208 56.7
Nn3g20646 Nelumbo nucifera HOM05D007153 ORTHO05D008769 1.9e-53 213.0 209 57.9
SGA_v2.0_scaffold130G34251 Striga asiatica HOM05D007153 ORTHO05D008769 1.9e-53 213.0 211 56.9
CsaV3_4G032710 Cucumis sativus L. HOM05D007153 ORTHO05D008769 4.3e-53 211.8 214 55.6
Sed0027291 Sechium edule HOM05D007153 ORTHO05D008769 4.3e-53 211.8 214 55.6
CANSAT56G2533 Cannabis sativa HOM05D007153 ORTHO05D008769 7.4e-53 211.1 213 55.4
Potri.011G101800 Populus trichocarpa HOM05D007153 ORTHO05D008769 7.4e-53 211.1 209 57.4
ClCG11G017050 Citrullus lanatus HOM05D007153 ORTHO05D008769 1.3e-52 210.3 214 54.7
Dinv26693 Davidia involucrata HOM05D007153 ORTHO05D008769 1.3e-52 210.3 209 56.5
QL08p027831 Quercus lobata HOM05D007153 ORTHO05D008769 1.3e-52 210.3 222 54.5
Atru.chr2.1920 Acer truncatum HOM05D007153 ORTHO05D008769 2.1e-52 209.5 209 56.9
ECA236G0620 Erigeron canadensis HOM05D007153 ORTHO05D008769 2.8e-52 209.1 205 56.6
Haze_08464 Corylus avellana HOM05D007153 ORTHO05D008769 8.2e-52 207.6 222 53.6
MELO3C016680.2 Cucumis melo HOM05D007153 ORTHO05D008769 1.1e-51 207.2 214 55.1
Hund10387 Selenicereus undatus HOM05D007153 ORTHO05D008769 1.4e-51 206.8 213 55.4
CiPaw.11G154200 Carya illinoinensis HOM05D007153 ORTHO05D008769 3.1e-51 205.7 220 54.5
AUR62019681 Chenopodium quinoa HOM05D007153 ORTHO05D008769 3.1e-51 205.7 205 56.6
HanXRQChr15g0495311 Helianthus annuus HOM05D007153 ORTHO05D008769 3.1e-51 205.7 207 54.6
Nitab4.5_0001140g0070 Nicotiana tabacum HOM05D007153 ORTHO05D008769 3.1e-51 205.7 175 66.9
Cfa019490 Carpinus fangiana HOM05D007153 ORTHO05D008769 5.3e-51 204.9 222 54.1
Ah.06g187590 Amaranthus hybridus HOM05D007153 ORTHO05D008769 9.0e-51 204.1 209 53.6
Atru.chr2.1917 Acer truncatum HOM05D007153 ORTHO05D008769 1.5e-50 203.4 207 55.6
AUR62039568 Chenopodium quinoa HOM05D007153 ORTHO05D008769 1.5e-50 203.4 209 55.5
arahy.Tifrunner.gnm1.ann1.C8MR0W Arachis hypogaea HOM05D007153 ORTHO05D008769 4.5e-50 201.8 223 53.4
TPR.G6902 Trifolium pratense HOM05D007153 ORTHO05D008769 4.5e-50 201.8 220 52.3
Lsat_1_v5_gn_7_100481 Lactuca sativa HOM05D007153 ORTHO05D008769 5.9e-50 201.4 207 52.7
arahy.Tifrunner.gnm1.ann1.57A972 Arachis hypogaea HOM05D007153 ORTHO05D008769 1.0e-49 200.7 223 52.9
Medtr2g072510 Medicago truncatula HOM05D007153 ORTHO05D008769 1.0e-49 200.7 205 55.6
MBI07_g07830_MAGBIO Magnolia biondii HOM05D007153 ORTHO05D008769 1.3e-49 200.3 211 53.6
THA.LOC104810421 Tarenaya hassleriana HOM05D007153 ORTHO05D008769 1.3e-49 200.3 201 56.2
AL1G62070 Arabidopsis lyrata HOM05D007153 ORTHO05D008769 6.5e-49 198.0 205 54.6
Psat1g008400 Pisum sativum HOM05D007153 ORTHO05D008769 1.1e-48 197.2 205 54.1
Ca_03417_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 1.4e-48 196.8 205 54.1
Ca_29738_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 1.4e-48 196.8 205 54.1
A06p00970 Brassica napus HOM05D007153 ORTHO05D008769 1.9e-48 196.4 205 54.6
AT1G53520 Arabidopsis thaliana HOM05D007153 ORTHO05D008769 2.5e-48 196.1 207 53.6
Carub.0001s4270 Capsella rubella HOM05D007153 ORTHO05D008769 3.2e-48 195.7 205 54.6
C06p09270 Brassica napus HOM05D007153 ORTHO05D008769 7.2e-48 194.5 205 53.7
BcaC08g43538 Brassica carinata HOM05D007153 ORTHO05D008769 1.2e-47 193.7 205 53.2
BolC6t36005H Brassica oleracea HOM05D007153 ORTHO05D008769 1.2e-47 193.7 205 53.2
Glyma.15G242900 Glycine max HOM05D007153 ORTHO05D008769 2.1e-47 193.0 205 53.7
unitig_747.g21594 Utricularia gibba HOM05D007153 ORTHO05D008769 2.1e-47 193.0 211 52.6
BraA06t23324Z Brassica rapa HOM05D007153 ORTHO05D008769 6.1e-47 191.4 205 53.7
Aqoxy1G01815 Aquilegia oxysepala HOM05D007153 ORTHO05D008769 3.0e-46 189.1 208 50.0
Sp1g40050 Schrenkiella parvula HOM05D007153 ORTHO05D008769 3.9e-46 188.7 205 52.2
CARHR043760 Cardamine hirsuta HOM05D007153 ORTHO05D008769 1.5e-45 186.8 207 52.7
Thhalv10011696m.g Eutrema salsugineum HOM05D007153 ORTHO05D008769 1.9e-45 186.4 205 52.7
BcaB07g33323 Brassica carinata HOM05D007153 ORTHO05D008769 3.3e-45 185.7 205 52.7
Lalb_Chr01g0016241 Lupinus albus HOM05D007153 ORTHO05D008769 5.7e-45 184.9 205 50.7
FAN16G1619 Fragaria x ananassa HOM05D007153 ORTHO05D008769 1.6e-44 183.3 125 74.4
VMungo1080G0806 Vigna mungo HOM05D007153 ORTHO05D008769 2.8e-44 182.6 205 50.7
Aa31LG10G1690 Aethionema arabicum HOM05D007153 ORTHO05D008769 6.3e-44 181.4 207 51.7
Phvul.005G064500 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 1.8e-43 179.9 205 49.3
FAN11G0553 Fragaria x ananassa HOM05D007153 ORTHO05D008769 2.4e-43 179.5 125 73.6
Potri.001G380700 Populus trichocarpa HOM05D007153 ORTHO05D008769 3.1e-43 179.1 189 56.1
CDE04G0295 Ceratophyllum demersum HOM05D007153 ORTHO05D008769 1.3e-41 173.7 201 49.8
Phvul.005G064600 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 5.5e-40 168.3 205 47.8
Cpa.g.sc77.72 Carica papaya HOM05D007153 ORTHO05D008769 9.4e-40 167.5 122 71.3
EL10Ac4g08449 Beta vulgaris HOM05D007153 ORTHO05D008769 1.0e-38 164.1 123 67.5
Lj3g0020060 Lotus japonicus HOM05D007153 ORTHO05D008769 3.9e-38 162.2 121 68.6
Manes.15G100200 Manihot esculenta HOM05D007153 ORTHO05D008769 6.7e-38 161.4 165 55.2
Glyma.13G262500 Glycine max HOM05D007153 ORTHO05D008769 1.8e-35 153.3 120 65.8
Os02g0320300 Oryza sativa ssp. japonica HOM05D007153 ORTHO05D008769 5.9e-26 121.7 197 38.1
Mapoly0044s0117 Marchantia polymorpha HOM05D007153 ORTHO05D008769 1.9e-24 116.7 200 35.0
Mapoly0077s0003 Marchantia polymorpha HOM05D007153 ORTHO05D008769 7.2e-24 114.8 204 34.8
Zm00001eb238460 Zea mays HOM05D007153 ORTHO05D008769 2.7e-23 112.8 200 35.5
Pp3c10_20100 Physcomitrium patens HOM05D007153 ORTHO05D008769 4.0e-22 109.0 213 34.3
Sabra11G0085100 Salix brachista HOM05D007153 ORTHO05D008769 3.2e-16 89.4 102 52.0
SMO147G0119 Selaginella moellendorffii HOM05D007153 ORTHO05D008769 5.5e-16 88.6 116 44.0
MCO15G144 Micromonas commoda HOM05D007153 ORTHO05D008769 1.3e-12 77.4 212 31.1
AagrBONN_evm.TU.Sc2ySwM_228.3568 Anthoceros agrestis HOM05D007153 ORTHO05D008769 1.4e-11 73.9 187 29.4
Pp3c26_4040 Physcomitrium patens HOM05D006808 ORTHO05D008610 1.5e-08 63.9 127 29.9
Pp3c4_25770 Physcomitrium patens HOM05D006808 ORTHO05D008610 1.2e-07 60.8 127 28.3
Cre01.g007600 Chlamydomonas reinhardtii HOM05D007153 ORTHO05D008769 4.7e-07 58.9 122 36.1


User provided reference genes

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