Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2724 Capsella rubella HOM05D008251 ORTHO05D010450 8.8e-35 149.8 81 100.0
AL8G44070 Arabidopsis lyrata HOM05D008251 ORTHO05D010450 1.4e-24 115.9 80 81.2
Thhalv10005599m.g Eutrema salsugineum HOM05D008251 ORTHO05D010450 2.3e-22 108.6 78 79.5
CARHR280360 Cardamine hirsuta HOM05D008251 ORTHO05D010450 1.1e-21 106.3 72 79.2
AT5G67265 Arabidopsis thaliana HOM05D008251 ORTHO05D010450 5.6e-21 104.0 78 73.1
BcaC06g34809 Brassica carinata HOM05D008251 ORTHO05D010450 1.2e-20 102.8 77 74.0
Sp2g29400 Schrenkiella parvula HOM05D008251 ORTHO05D010450 4.0e-19 97.8 68 77.9
C07p24410 Brassica napus HOM05D008251 ORTHO05D010450 1.5e-18 95.9 70 75.7
A07p16690 Brassica napus HOM05D008251 ORTHO05D010450 2.6e-18 95.1 70 75.7
BraA07t29392Z Brassica rapa HOM05D001855 ORTHO05D002493 2.6e-18 95.1 70 75.7
BcaB02g09949 Brassica carinata HOM05D008251 ORTHO05D010450 9.5e-13 76.6 78 59.0
FAN19G1615 Fragaria x ananassa HOM05D008251 ORTHO05D010450 1.6e-12 75.9 81 53.1
FAN26G2689 Fragaria x ananassa HOM05D008251 ORTHO05D010450 1.6e-12 75.9 81 53.1
FAN28G2061 Fragaria x ananassa HOM05D008251 ORTHO05D010450 1.6e-12 75.9 81 53.1
TPR.G26911 Trifolium pratense HOM05D008251 ORTHO05D010450 2.1e-12 75.5 54 72.2
FvH4_1g16720 Fragaria vesca HOM05D008251 ORTHO05D010450 8.1e-12 73.6 81 51.9
FAN23G2776 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.1e-12 73.6 81 51.9
THA.LOC104819244 Tarenaya hassleriana HOM05D008251 ORTHO05D010450 8.1e-12 73.6 66 63.6
Ca_24740_v3 Cicer arietinum L. HOM05D008251 ORTHO05D010450 8.9e-11 70.1 76 52.6
Medtr5g016530 Medicago truncatula HOM05D008251 ORTHO05D010450 1.5e-10 69.3 78 52.6
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 7.5e-10 67.0 79 53.2
Sed0009308 Sechium edule HOM05D008251 ORTHO05D010450 7.5e-10 67.0 82 47.6
Glyma.01G189900 Glycine max HOM05D008251 ORTHO05D010450 9.9e-10 66.6 62 58.1
Gohir.A10G225800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 1.7e-09 65.9 80 53.8
Psat2g168200 Pisum sativum HOM05D008251 ORTHO05D010450 1.7e-09 65.9 76 48.7
Cpa.g.sc6.102 Carica papaya HOM05D008251 ORTHO05D010450 3.7e-09 64.7 72 52.8
Lj2g0015966 Lotus japonicus HOM05D008251 ORTHO05D010450 3.7e-09 64.7 75 49.3
Dinv26862 Davidia involucrata HOM05D008251 ORTHO05D010450 4.9e-09 64.3 53 62.3
Gohir.D10G238324 Gossypium hirsutum HOM05D008251 ORTHO05D010450 4.9e-09 64.3 80 53.8
Gorai.011G273800 Gossypium raimondii HOM05D008251 ORTHO05D010450 4.9e-09 64.3 80 53.8
MD02G1178400 Malus domestica HOM05D008251 ORTHO05D010450 1.4e-08 62.8 81 50.6
Thecc.01G063000 Theobroma cacao HOM05D008251 ORTHO05D010450 2.4e-08 62.0 79 51.9
Oeu009921.1 Olea europaea HOM05D000033 ORTHO05D002493 4.1e-08 61.2 60 58.3
CsaV3_2G035600 Cucumis sativus L. HOM05D008251 ORTHO05D010450 5.4e-08 60.8 81 49.4
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 5.4e-08 60.8 73 53.4
Peaxi162Scf00549g00047 Petunia axillaris HOM05D008251 ORTHO05D010450 7.1e-08 60.5 78 51.3
Phvul.010G095200 Phaseolus vulgaris HOM05D008251 ORTHO05D010450 1.2e-07 59.7 56 57.1
Prupe.6G229400 Prunus persica HOM05D008251 ORTHO05D010450 2.1e-07 58.9 82 50.0
TWI73G1017 Tripterygium wilfordii HOM05D008251 ORTHO05D010450 6.0e-07 57.4 76 48.7
QL05p026832 Quercus lobata HOM05D008251 ORTHO05D010450 7.8e-07 57.0 81 45.7
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 1.0e-06 56.6 77 49.4
Gorai.008G078500 Gossypium raimondii HOM05D008251 ORTHO05D010450 3.0e-06 55.1 57 56.1
arahy.Tifrunner.gnm1.ann1.UR349I Arachis hypogaea HOM05D000049 ORTHO05D000027 3.9e-06 54.7 80 42.5
Sopen02g037520 Solanum pennellii HOM05D008251 ORTHO05D010450 3.9e-06 54.7 56 53.6
Gohir.D12G071900 Gossypium hirsutum HOM05D008251 ORTHO05D010450 5.1e-06 54.3 56 57.1


User provided reference genes

Program Settings