Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 6.6e-100 367.5 197 100.0
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 2.4e-57 226.1 203 70.9
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 5.7e-43 178.3 195 61.0
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 5.7e-43 178.3 195 61.0
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 8.2e-42 174.5 183 61.7
AL8G43660 Arabidopsis lyrata HOM05D007502 ORTHO05D010230 1.1e-41 174.1 153 70.6
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 1.4e-38 163.7 195 58.5
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 7.1e-38 161.4 187 59.9
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 7.9e-37 157.9 162 61.7
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 3.1e-33 146.0 185 56.2
Aa31LG1G16180 Aethionema arabicum HOM05D007502 ORTHO05D010230 2.6e-19 99.8 166 46.4
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 4.1e-17 92.4 187 43.9
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 8.5e-15 84.7 186 43.5
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 5.2e-12 75.5 189 38.6
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 5.2e-12 75.5 191 39.3
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 2.6e-11 73.2 184 36.4
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 2.8e-10 69.7 184 34.8
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 3.7e-10 69.3 193 36.3
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 8.2e-10 68.2 197 38.6
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 1.1e-09 67.8 182 38.5
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 4.1e-09 65.9 193 35.2
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 7.0e-09 65.1 193 36.3
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 7.0e-09 65.1 185 37.8
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 1.2e-08 64.3 182 36.3
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 2.6e-08 63.2 186 33.3
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 3.5e-08 62.8 187 33.7
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 5.9e-08 62.0 183 33.9
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 2.2e-07 60.1 195 34.4
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 6.5e-07 58.5 176 33.0
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 1.9e-06 57.0 105 41.9
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 2.5e-06 56.6 183 33.3
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 4.2e-06 55.8 114 40.4
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 9.4e-06 54.7 201 35.3
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 9.4e-06 54.7 116 37.1


User provided reference genes

Program Settings