Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2648 Capsella rubella HOM05D013367 ORTHO05D009207 5.4e-59 230.7 111 100.0
AT5G65613 Arabidopsis thaliana HOM05D013367 ORTHO05D009207 9.6e-40 166.8 116 77.6
AL8G43200 Arabidopsis lyrata HOM05D013367 ORTHO05D009207 6.2e-39 164.1 100 80.0
AL112U10020 Arabidopsis lyrata HOM05D013367 ORTHO05D009207 3.1e-38 161.8 100 79.0
C03p60140 Brassica napus HOM05D013367 ORTHO05D009207 4.8e-31 137.9 110 67.3
BolC3t18278H Brassica oleracea HOM05D013367 ORTHO05D009207 4.8e-31 137.9 110 67.3
Thhalv10005166m.g Eutrema salsugineum HOM05D013367 ORTHO05D009207 2.0e-29 132.5 117 65.8
A06p32450 Brassica napus HOM05D013367 ORTHO05D009207 1.3e-28 129.8 118 62.7
BraA06t26169Z Brassica rapa HOM05D013367 ORTHO05D009207 1.3e-28 129.8 118 62.7
Sp2g28700 Schrenkiella parvula HOM05D013367 ORTHO05D009207 1.2e-26 123.2 109 63.3
BcaC01g02852 Brassica carinata HOM05D013367 ORTHO05D009207 3.9e-17 91.7 77 62.3
THA.LOC109116076 Tarenaya hassleriana HOM05D013367 ORTHO05D009207 1.5e-16 89.7 118 44.9
Prupe.6G209000 Prunus persica HOM05D007928 ORTHO05D009207 1.1e-08 63.5 97 41.2
COL.COLO4_11686 Corchorus olitorius HOM05D007928 ORTHO05D009207 2.2e-07 59.3 91 42.9
Ciclev10026783m.g Citrus clementina HOM05D007928 ORTHO05D009207 3.7e-07 58.5 105 36.2
Gohir.D11G215100 Gossypium hirsutum HOM05D007928 ORTHO05D009207 3.7e-07 58.5 92 38.0
Gorai.007G230900 Gossypium raimondii HOM05D007928 ORTHO05D009207 3.7e-07 58.5 92 38.0
Lalb_Chr16g0381521 Lupinus albus HOM05D007928 ORTHO05D009207 3.7e-07 58.5 105 35.2
Gohir.A11G208300 Gossypium hirsutum HOM05D007928 ORTHO05D009207 6.3e-07 57.8 92 38.0
Thecc.01G084700 Theobroma cacao HOM05D007928 ORTHO05D009207 8.2e-07 57.4 91 40.7
Nn5g29796 Nelumbo nucifera HOM05D007928 ORTHO05D009207 1.1e-06 57.0 101 44.6
Cfa006837 Carpinus fangiana HOM05D007928 ORTHO05D009207 2.4e-06 55.8 110 34.5
FvH4_1g19100 Fragaria vesca HOM05D007928 ORTHO05D009207 4.1e-06 55.1 103 35.0
FAN19G2807 Fragaria x ananassa HOM05D007928 ORTHO05D009207 4.1e-06 55.1 103 35.0
CsaV3_6G044800 Cucumis sativus L. HOM05D007928 ORTHO05D009207 6.9e-06 54.3 91 44.0
Gorai.007G058100 Gossypium raimondii HOM05D007928 ORTHO05D009207 6.9e-06 54.3 94 37.2


User provided reference genes

Program Settings