Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2572 Capsella rubella HOM05D009783 ORTHO05D011958 5.2e-57 224.2 115 100.0
AL139U10010 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 1.8e-25 119.4 102 69.6
AL8G35260 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 9.0e-25 117.1 102 68.6
AT5G64890 Arabidopsis thaliana HOM05D009783 ORTHO05D011958 2.0e-24 115.9 109 56.0
AL8G42380 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 2.2e-18 95.9 113 50.4
CARHR278900 Cardamine hirsuta HOM05D009783 ORTHO05D011958 1.7e-15 86.3 103 50.5
BcaC01g02722 Brassica carinata HOM05D009783 ORTHO05D011958 4.8e-10 68.2 110 40.9
C03p61280 Brassica napus HOM05D009783 ORTHO05D011958 4.8e-10 68.2 110 40.9
BolC3t18389H Brassica oleracea HOM05D009783 ORTHO05D011958 4.8e-10 68.2 110 40.9
BcaB02g09839 Brassica carinata HOM05D009783 ORTHO05D011958 9.1e-09 63.9 106 40.6
BcaB07g29764 Brassica carinata HOM05D009783 ORTHO05D011958 9.1e-09 63.9 104 45.2
AT5G64900 Arabidopsis thaliana HOM05D009783 ORTHO05D011958 2.2e-07 59.3 97 43.3
BraA02t09283Z Brassica rapa HOM05D009783 ORTHO05D011958 5.0e-07 58.2 111 41.4
Thhalv10005173m.g Eutrema salsugineum HOM05D009783 ORTHO05D011958 6.5e-07 57.8 106 39.6
A02p43560 Brassica napus HOM05D009783 ORTHO05D011958 1.9e-06 56.2 111 40.5
A06p31680 Brassica napus HOM05D009783 ORTHO05D011958 4.2e-06 55.1 109 34.9
CARHR278930 Cardamine hirsuta HOM05D009783 ORTHO05D011958 5.5e-06 54.7 106 39.6
BraA06t26103Z Brassica rapa HOM05D009783 ORTHO05D011958 9.4e-06 53.9 56 48.2


User provided reference genes

Program Settings