Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2571 Capsella rubella HOM05D012887 ORTHO05D008511 4.2e-87 324.7 168 100.0
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 3.5e-70 268.5 174 84.5
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 1.1e-68 263.5 173 82.7
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 4.5e-65 251.5 172 81.4
BcaB02g09838 Brassica carinata HOM05D012887 ORTHO05D008511 1.0e-40 170.6 150 66.0
Sp2g27960 Schrenkiella parvula HOM05D012887 ORTHO05D008511 8.5e-40 167.5 173 58.4
BolC3t18390H Brassica oleracea HOM05D012887 ORTHO05D008511 2.5e-39 166.0 168 58.9
BcaC01g02721 Brassica carinata HOM05D012887 ORTHO05D008511 7.2e-39 164.5 171 57.9
C03p61290 Brassica napus HOM05D012887 ORTHO05D008511 7.2e-39 164.5 171 57.9
BraA06t26102Z Brassica rapa HOM05D012887 ORTHO05D008511 1.4e-26 123.6 160 51.2
A06p31670 Brassica napus HOM05D012887 ORTHO05D008511 3.1e-26 122.5 160 50.6
Aa31LG1G17050 Aethionema arabicum HOM05D012887 ORTHO05D008511 1.6e-25 120.2 174 47.7
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 1.0e-24 117.5 169 45.0
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 1.9e-15 86.7 156 40.4
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 3.6e-14 82.4 171 35.1
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 4.7e-14 82.0 176 33.5
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 2.0e-12 76.6 181 33.7
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 2.6e-12 76.3 155 35.5
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 5.7e-12 75.1 154 35.1
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 7.5e-12 74.7 173 32.9
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 1.7e-11 73.6 169 32.5
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 3.7e-11 72.4 169 36.7
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 9.2e-10 67.8 172 32.0
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 1.2e-09 67.4 153 37.9
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 2.7e-09 66.2 170 36.5
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 7.8e-09 64.7 89 39.3
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.0e-08 64.3 155 34.2
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.3e-08 63.2 155 33.5
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 2.3e-08 63.2 101 42.6
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 3.9e-08 62.4 155 34.2
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 3.9e-08 62.4 146 35.6
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 8.6e-08 61.2 155 34.2
Sed0027168 Sechium edule HOM05D007384 ORTHO05D008511 1.1e-07 60.8 169 29.6
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 1.5e-07 60.5 171 33.3
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 1.9e-07 60.1 137 33.6
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 1.9e-07 60.1 158 34.8
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 2.5e-07 59.7 155 32.9
CiPaw.04G092400 Carya illinoinensis HOM05D007384 ORTHO05D008511 9.5e-07 57.8 161 34.2
Eucgr.I00328 Eucalyptus grandis HOM05D007384 ORTHO05D008511 1.2e-06 57.4 77 39.0
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 1.6e-06 57.0 155 32.9
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 2.1e-06 56.6 174 27.6
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 2.1e-06 56.6 162 34.6
arahy.Tifrunner.gnm1.ann1.66AXK3 Arachis hypogaea HOM05D007384 ORTHO05D008511 3.6e-06 55.8 163 33.1
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 3.6e-06 55.8 173 29.5
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 3.6e-06 55.8 173 29.5
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 4.7e-06 55.5 173 31.8
Lalb_Chr11g0068051 Lupinus albus HOM05D007384 ORTHO05D008511 6.2e-06 55.1 162 33.3
Psat5g065520 Pisum sativum HOM05D007384 ORTHO05D008511 6.2e-06 55.1 167 31.1
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 8.0e-06 54.7 160 32.5


User provided reference genes

Program Settings