Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 7.9e-94 347.4 184 100.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 2.0e-44 183.3 186 57.5
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 3.7e-43 179.1 180 56.1
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 1.1e-42 177.6 186 53.8
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 3.9e-40 169.1 184 54.3
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 1.1e-39 167.5 172 57.0
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 2.4e-34 149.8 186 52.2
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 2.4e-34 149.8 186 52.2
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 3.2e-34 149.4 186 52.2
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.2e-33 147.5 188 53.7
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 3.5e-33 146.0 186 51.1
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 4.6e-33 145.6 187 52.4
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 7.8e-33 144.8 186 50.5
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 3.9e-32 142.5 157 52.9
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 6.4e-27 125.2 156 50.6
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.9e-26 123.6 186 43.0
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 2.4e-26 123.2 169 48.5
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 8.9e-21 104.8 164 47.0
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 2.9e-19 99.8 183 41.5
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 3.9e-16 89.4 184 40.2
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 8.7e-16 88.2 185 36.2
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.1e-15 87.8 185 36.8
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 1.9e-15 87.0 185 36.2
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 5.6e-15 85.5 184 36.4
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 5.6e-15 85.5 186 37.1
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 5.6e-15 85.5 172 37.2
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 2.1e-14 83.6 184 38.6
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 2.1e-14 83.6 172 37.8
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 3.6e-14 82.8 184 37.0
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 6.2e-14 82.0 172 36.0
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 8.1e-14 81.6 182 34.6
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 8.1e-14 81.6 184 38.6
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 1.8e-13 80.5 184 35.3
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 2.4e-13 80.1 189 33.3
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 2.4e-13 80.1 172 36.6
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 5.3e-13 79.0 189 34.4
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 6.9e-13 78.6 184 35.9
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 1.2e-12 77.8 185 33.0
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.5e-12 77.4 193 33.7
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.0e-12 77.0 174 38.5
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 2.0e-12 77.0 162 37.0
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 4.5e-12 75.9 183 33.3
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 4.5e-12 75.9 186 34.4
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 5.8e-12 75.5 179 32.4
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 5.8e-12 75.5 182 34.6
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 5.8e-12 75.5 199 31.7
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 7.6e-12 75.1 184 36.4
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.3e-11 74.3 187 34.8
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.7e-11 73.9 161 34.8
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 2.2e-11 73.6 160 35.6
BcaC01g02700 Brassica carinata HOM05D005900 ORTHO05D007306 2.2e-11 73.6 186 38.7
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 2.2e-11 73.6 183 32.2
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 2.9e-11 73.2 174 33.9
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 3.8e-11 72.8 175 34.9
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 4.9e-11 72.4 184 32.6
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 4.9e-11 72.4 177 36.2
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 6.4e-11 72.0 186 32.3
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 8.4e-11 71.6 188 35.6
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 1.1e-10 71.2 184 32.6
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.4e-10 70.9 183 31.7
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 1.9e-10 70.5 181 28.7
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 2.4e-10 70.1 159 37.1
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 4.2e-10 69.3 178 34.8
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 9.3e-10 68.2 165 33.9
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 9.3e-10 68.2 169 32.0
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 1.6e-09 67.4 186 29.6
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.6e-09 67.4 156 35.3
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 2.1e-09 67.0 173 31.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 2.1e-09 67.0 151 37.1
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.1e-09 67.0 181 29.8
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 2.7e-09 66.6 210 29.0
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 2.7e-09 66.6 173 35.3
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.7e-09 66.6 183 33.9
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 3.5e-09 66.2 183 35.0
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 4.6e-09 65.9 196 31.1
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 4.6e-09 65.9 177 29.9
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 4.6e-09 65.9 181 29.8
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 6.0e-09 65.5 169 31.4
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 6.0e-09 65.5 169 31.4
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 6.0e-09 65.5 169 31.4
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 6.0e-09 65.5 185 34.1
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 1.0e-08 64.7 185 31.4
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.0e-08 64.7 175 31.4
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.0e-08 64.7 169 33.1
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.8e-08 63.9 177 30.5
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.3e-08 63.5 182 31.9
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 5.1e-08 62.4 129 36.4
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 5.1e-08 62.4 189 30.2
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 6.7e-08 62.0 144 31.2
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 8.7e-08 61.6 148 31.1
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 8.7e-08 61.6 183 30.1
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 8.7e-08 61.6 183 30.6
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 8.7e-08 61.6 171 32.2
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.1e-07 61.2 168 31.0
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 4.3e-07 59.3 184 33.7
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.3e-06 57.8 168 31.5
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.1e-06 57.0 185 34.1
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.1e-06 57.0 183 31.7
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 2.1e-06 57.0 232 28.0
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.8e-06 55.8 172 31.4
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 8.1e-06 55.1 182 30.8


User provided reference genes

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