Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2213 Capsella rubella HOM05D004234 ORTHO05D004670 6.0e-234 813.9 445 100.0
AT5G61450 Arabidopsis thaliana HOM05D004234 ORTHO05D004670 4.2e-219 764.6 450 91.8
AL8G38140 Arabidopsis lyrata HOM05D004234 ORTHO05D004670 9.3e-211 736.9 451 90.0
Thhalv10004229m.g Eutrema salsugineum HOM05D004234 ORTHO05D004670 2.2e-204 715.7 452 84.7
Sp2g24650 Schrenkiella parvula HOM05D004234 ORTHO05D004670 4.8e-199 698.0 446 83.4
C07p45120 Brassica napus HOM05D004234 ORTHO05D004670 3.3e-192 675.2 449 81.7
BraA03t13827Z Brassica rapa HOM05D004234 ORTHO05D004670 7.4e-192 674.1 451 80.9
A03p47040 Brassica napus HOM05D004234 ORTHO05D004670 2.8e-191 672.2 451 80.7
BcaC06g33234 Brassica carinata HOM05D004234 ORTHO05D004670 6.3e-191 671.0 449 81.3
BolC7t45034H Brassica oleracea HOM05D004234 ORTHO05D004670 8.2e-191 670.6 450 81.1
BcaC06g33149 Brassica carinata HOM05D004234 ORTHO05D004670 9.1e-182 640.6 447 77.6
Aa31LG11G1950 Aethionema arabicum HOM05D004234 ORTHO05D004670 5.2e-161 571.6 449 72.2
Potri.001G125700 Populus trichocarpa HOM05D004234 ORTHO05D004670 2.6e-152 542.7 429 70.4
Medtr4g036835 Medicago truncatula HOM05D004234 ORTHO05D004670 8.3e-151 537.7 431 68.0
Hma1.2p1_0432F.1_g151850 Hydrangea macrophylla HOM05D004234 ORTHO05D004670 2.4e-150 536.2 433 67.9
Potri.003G108000 Populus trichocarpa HOM05D004234 ORTHO05D004670 3.1e-150 535.8 430 68.6
QL09p005405 Quercus lobata HOM05D004234 ORTHO05D004670 3.1e-150 535.8 411 69.6
Gohir.A03G059300 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.2e-149 533.9 426 68.8
Sabra03G0074900 Salix brachista HOM05D004234 ORTHO05D004670 1.6e-149 533.5 421 69.4
Gohir.D03G106600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 2.0e-149 533.1 417 69.8
TWI39G0359 Tripterygium wilfordii HOM05D004234 ORTHO05D004670 3.5e-149 532.3 435 67.1
ECA233G5771 Erigeron canadensis HOM05D004234 ORTHO05D004670 4.5e-149 531.9 406 70.7
Dinv06568 Davidia involucrata HOM05D004234 ORTHO05D004670 5.9e-149 531.6 411 70.1
CSS0018772 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 7.8e-149 531.2 417 68.6
Manes.06G133800 Manihot esculenta HOM05D004234 ORTHO05D004670 1.3e-148 530.4 437 66.6
COL.COLO4_14105 Corchorus olitorius HOM05D004234 ORTHO05D004670 2.3e-148 529.6 421 69.1
Oeu028187.2 Olea europaea HOM05D004234 ORTHO05D004670 5.0e-148 528.5 416 69.0
GSVIVG01014047001 Vitis vinifera HOM05D004234 ORTHO05D004670 6.6e-148 528.1 428 67.3
PGR042G3222 Punica granatum HOM05D004234 ORTHO05D004670 8.6e-148 527.7 422 68.5
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea HOM05D004234 ORTHO05D004670 1.5e-147 526.9 436 66.5
Lj3g0001566 Lotus japonicus HOM05D004234 ORTHO05D004670 1.5e-147 526.9 415 69.4
FvH4_7g05310 Fragaria vesca HOM05D004234 ORTHO05D004670 1.9e-147 526.6 397 71.8
FAN03G3162 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.9e-147 526.6 397 71.8
unitig_46.g18765 Utricularia gibba HOM05D004234 ORTHO05D004670 2.5e-147 526.2 411 69.3
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea HOM05D004234 ORTHO05D004670 3.3e-147 525.8 438 66.0
Glyma.09G229600 Glycine max HOM05D004234 ORTHO05D004670 3.3e-147 525.8 416 68.0
Sed0010040 Sechium edule HOM05D004234 ORTHO05D004670 3.3e-147 525.8 419 68.0
Actinidia31776 Actinidia chinensis HOM05D004234 ORTHO05D004670 5.6e-147 525.0 411 69.1
FAN10G4258 Fragaria x ananassa HOM05D004234 ORTHO05D004670 7.3e-147 524.6 397 72.0
Lalb_Chr01g0000341 Lupinus albus HOM05D004234 ORTHO05D004670 7.3e-147 524.6 428 67.1
Thecc.03G153900 Theobroma cacao HOM05D004234 ORTHO05D004670 7.3e-147 524.6 426 67.4
RcHm_v2.0_Chr1g0331961 Rosa chinensis HOM05D004234 ORTHO05D004670 9.5e-147 524.2 409 70.4
Ciclev10004769m.g Citrus clementina HOM05D004234 ORTHO05D004670 2.8e-146 522.7 440 64.1
HanXRQChr05g0142531 Helianthus annuus HOM05D004234 ORTHO05D004670 2.8e-146 522.7 405 67.7
Psat7g159560 Pisum sativum HOM05D004234 ORTHO05D004670 4.7e-146 521.9 426 67.8
Nn6g33942 Nelumbo nucifera HOM05D004234 ORTHO05D004670 6.1e-146 521.5 413 68.5
Phvul.011G007500 Phaseolus vulgaris HOM05D004234 ORTHO05D004670 6.1e-146 521.5 411 68.9
MD07G1252500 Malus domestica HOM05D004234 ORTHO05D004670 1.0e-145 520.8 412 68.0
Sopen03g024080 Solanum pennellii HOM05D004234 ORTHO05D004670 1.0e-145 520.8 414 66.4
CsaV3_3G050070 Cucumis sativus L. HOM05D004234 ORTHO05D004670 1.4e-145 520.4 425 66.6
Gorai.003G113100 Gossypium raimondii HOM05D004234 ORTHO05D004670 1.4e-145 520.4 411 68.9
VMungo1127G0923 Vigna mungo HOM05D004234 ORTHO05D004670 1.8e-145 520.0 404 69.1
Duzib084G1335 Durio zibethinus HOM05D004234 ORTHO05D004670 2.3e-145 519.6 415 68.9
Migut.F00484 Erythranthe guttata HOM05D004234 ORTHO05D004670 2.3e-145 519.6 425 67.5
PSO238G0034 Papaver somniferum HOM05D004234 ORTHO05D004670 2.3e-145 519.6 439 64.9
Prupe.2G276000 Prunus persica HOM05D004234 ORTHO05D004670 2.3e-145 519.6 415 68.2
SalBow8G0184 Salvia bowleyana HOM05D004234 ORTHO05D004670 2.3e-145 519.6 394 70.3
SalBow8G4519 Salvia bowleyana HOM05D004234 ORTHO05D004670 2.3e-145 519.6 394 70.3
DCAR_014620 Daucus carota HOM05D004234 ORTHO05D004670 4.0e-145 518.8 422 66.6
ClCG09G013080 Citrullus lanatus HOM05D004234 ORTHO05D004670 8.9e-145 517.7 425 66.4
MD01G1182200 Malus domestica HOM05D004234 ORTHO05D004670 1.2e-144 517.3 417 69.8
Lj1A979T78 Lonicera japonica HOM05D004234 ORTHO05D004670 2.6e-144 516.2 406 68.7
Actinidia13581 Actinidia chinensis HOM05D004234 ORTHO05D004670 3.4e-144 515.8 413 68.5
Solyc03g093300.3 Solanum lycopersicum HOM05D004234 ORTHO05D004670 4.4e-144 515.4 397 68.5
Lsat_1_v5_gn_1_117561 Lactuca sativa HOM05D004234 ORTHO05D004670 2.2e-143 513.1 388 69.3
SGA_v2.0_scaffold2G01218 Striga asiatica HOM05D004234 ORTHO05D004670 2.2e-143 513.1 428 66.1
Gohir.A12G198000 Gossypium hirsutum HOM05D004234 ORTHO05D004670 2.9e-143 512.7 407 67.6
Gohir.D12G200600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.4e-142 510.4 407 67.3
Gorai.008G215700 Gossypium raimondii HOM05D004234 ORTHO05D004670 1.4e-142 510.4 407 67.3
Peaxi162Scf00241g00030 Petunia axillaris HOM05D004234 ORTHO05D004670 4.1e-142 508.8 429 64.6
Eucgr.H04780 Eucalyptus grandis HOM05D004234 ORTHO05D004670 7.0e-142 508.1 415 66.7
Nitab4.5_0002816g0120 Nicotiana tabacum HOM05D004234 ORTHO05D004670 9.2e-142 507.7 407 66.6
Atru.chr1.756 Acer truncatum HOM05D004234 ORTHO05D004670 1.2e-141 507.3 403 66.7
ATR0317G048 Amborella trichopoda HOM05D004234 ORTHO05D004670 4.6e-141 505.4 406 68.7
Aqoxy1G01638 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 4.6e-141 505.4 435 65.5
Aqoxy5G04150 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 4.6e-141 505.4 435 65.5
Cc02_g04370 Coffea canephora HOM05D004234 ORTHO05D004670 4.6e-141 505.4 419 64.9
Sed0020354 Sechium edule HOM05D004234 ORTHO05D004670 4.6e-141 505.4 413 65.6
HPP92_020352 Vanilla planifolia HOM05D004234 ORTHO05D004670 1.1e-139 500.7 436 64.0
Sc19g0002070 Simmondsia chinensis HOM05D004234 ORTHO05D004670 2.5e-139 499.6 415 66.3
TAR636G1879 Trochodendron aralioides HOM05D004234 ORTHO05D004670 7.3e-139 498.0 414 69.3
AUR62015488 Chenopodium quinoa HOM05D004234 ORTHO05D004670 1.6e-138 496.9 466 60.9
Os03g0102400 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 4.7e-138 495.4 409 63.6
MELO3C003311.2 Cucumis melo HOM05D004234 ORTHO05D004670 6.2e-138 495.0 496 57.5
Glyma.12G006700 Glycine max HOM05D004234 ORTHO05D004670 2.3e-137 493.0 416 65.1
Lsat_1_v5_gn_9_51980 Lactuca sativa HOM05D004234 ORTHO05D004670 1.5e-136 490.3 400 67.0
Prupe.2G276100 Prunus persica HOM05D004234 ORTHO05D004670 1.7e-135 486.9 394 64.5
Os07g0466200 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 3.7e-135 485.7 400 64.5
Zm00001eb404400 Zea mays HOM05D004234 ORTHO05D004670 4.9e-135 485.3 422 62.8
Hund11832 Selenicereus undatus HOM05D004234 ORTHO05D004670 4.1e-134 482.3 411 65.0
Ca_25531_v3 Cicer arietinum L. HOM05D004234 ORTHO05D004670 7.8e-133 478.0 414 63.8
Nn1g00980 Nelumbo nucifera HOM05D004234 ORTHO05D004670 1.7e-132 476.9 408 64.5
PSO210G3536 Papaver somniferum HOM05D004234 ORTHO05D004670 5.6e-131 471.9 440 61.1
Rhsim09G0190900 Rhododendron simsii HOM05D004234 ORTHO05D004670 1.6e-130 470.3 529 53.5
C07p40880 Brassica napus HOM05D004234 ORTHO05D004670 4.7e-130 468.8 365 71.8
BolC7t44614H Brassica oleracea HOM05D004234 ORTHO05D004670 3.7e-127 459.1 365 70.7
MD07G1252600 Malus domestica HOM05D004234 ORTHO05D004670 6.4e-127 458.4 387 63.3
Mapoly0072s0015 Marchantia polymorpha HOM05D004234 ORTHO05D004670 9.2e-126 454.5 487 54.4
RcHm_v2.0_Chr1g0374151 Rosa chinensis HOM05D004234 ORTHO05D004670 4.6e-125 452.2 395 57.5
Pp3c17_11550 Physcomitrium patens HOM05D004234 ORTHO05D004670 1.3e-124 450.7 394 62.9
Pp3c2_13380 Physcomitrium patens HOM05D004234 ORTHO05D004670 1.7e-124 450.3 403 61.8
FvH4_7g27310 Fragaria vesca HOM05D004234 ORTHO05D004670 3.9e-124 449.1 395 57.7
Pp3c14_12080 Physcomitrium patens HOM05D004234 ORTHO05D004670 6.6e-124 448.4 394 62.9
CARHR275210 Cardamine hirsuta HOM05D004234 ORTHO05D004670 2.8e-122 443.0 265 86.8
Ah.07g207720 Amaranthus hybridus HOM05D004234 ORTHO05D004670 1.8e-121 440.3 452 58.8
Nitab4.5_0003490g0020 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.8e-121 440.3 374 64.2
FAN06G0557 Fragaria x ananassa HOM05D004234 ORTHO05D004670 4.0e-121 439.1 395 57.2
Medtr1g056720 Medicago truncatula HOM05D004234 ORTHO05D004670 4.0e-121 439.1 360 66.1
AagrBONN_evm.TU.Sc2ySwM_117.258 Anthoceros agrestis HOM05D004234 ORTHO05D004670 5.2e-121 438.7 436 58.7
Lsat_1_v5_gn_8_8740 Lactuca sativa HOM05D004234 ORTHO05D004670 1.5e-120 437.2 407 60.2
BcaNung02453 Brassica carinata HOM05D004234 ORTHO05D004670 5.8e-120 435.3 338 71.3
EL10Ac3g05852 Beta vulgaris HOM05D004234 ORTHO05D004670 1.3e-119 434.1 427 59.3
CAN.G48.41 Capsicum annuum HOM05D004234 ORTHO05D004670 4.3e-115 419.1 390 59.2
SMO357G0012 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 7.3e-115 418.3 411 56.7
Lsat_1_v5_gn_1_117520 Lactuca sativa HOM05D004234 ORTHO05D004670 3.1e-113 412.9 394 58.6
AUR62002211 Chenopodium quinoa HOM05D004234 ORTHO05D004670 2.6e-112 409.8 355 65.6
FAN03G0204 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.4e-112 409.5 407 53.8
FAN01G2714 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.9e-110 403.7 397 59.2
Duzib205G0275 Durio zibethinus HOM05D004234 ORTHO05D004670 5.4e-110 402.1 383 61.9
CiPaw.04G059200 Carya illinoinensis HOM05D004234 ORTHO05D004670 9.3e-110 401.4 279 77.4
FAN06G1565 Fragaria x ananassa HOM05D004234 ORTHO05D004670 5.1e-108 395.6 358 57.3
Nitab4.5_0000262g0110 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.9e-107 393.7 407 55.8
Peaxi162Scf00304g01343 Petunia axillaris HOM05D004234 ORTHO05D004670 4.3e-107 392.5 384 56.5
FAN03G2107 Fragaria x ananassa HOM05D002503 ORTHO05D004670 9.9e-104 381.3 364 55.2
FAN10G3280 Fragaria x ananassa HOM05D002503 ORTHO05D004670 1.7e-103 380.6 363 55.4
CAN.G330.4 Capsicum annuum HOM05D004234 ORTHO05D004670 1.3e-100 370.9 350 57.4
Lj8A43G57 Lonicera japonica HOM05D004234 ORTHO05D004670 3.1e-97 359.8 390 53.6
CBR_g12525 Chara braunii HOM05D004234 ORTHO05D004670 1.1e-89 334.7 579 40.4
FAN10G1071 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.2e-85 321.2 390 47.9
SMO203G0101 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 9.7e-83 311.6 313 55.9
Sabra01G0096800 Salix brachista HOM05D004234 ORTHO05D004670 4.1e-81 306.2 281 63.0
Solyc06g034180.2 Solanum lycopersicum HOM05D004234 ORTHO05D004670 4.2e-78 296.2 335 53.1
PGSC0003DMG400021593 Solanum tuberosum HOM05D004234 ORTHO05D004670 7.7e-72 275.4 370 45.9
arahy.Tifrunner.gnm1.ann1.EHKS3S Arachis hypogaea HOM05D004234 ORTHO05D004670 1.7e-71 274.2 297 54.9
Lsat_1_v5_gn_1_117540 Lactuca sativa HOM05D004234 ORTHO05D004670 1.5e-62 244.6 279 51.6
Nitab4.5_0000448g0090 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.1e-59 235.0 291 49.5
Cpa.g.sc4200.1 Carica papaya HOM05D004234 ORTHO05D004670 1.7e-58 231.1 121 92.6
SHI13981 Sapria himalayana HOM05D004234 ORTHO05D004670 3.2e-54 216.9 232 56.0
vmacro09913 Vaccinium macrocarpon HOM05D004234 ORTHO05D004670 4.7e-53 213.0 219 57.5
Cre03.g201000 Chlamydomonas reinhardtii HOM05D004234 ORTHO05D004670 1.6e-45 188.0 322 35.4
Sopen06g015930 Solanum pennellii HOM05D004234 ORTHO05D000001 4.7e-45 186.4 103 85.4
CSS0026342 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 8.3e-42 175.6 126 73.8
arahy.Tifrunner.gnm1.ann1.J8KP6L Arachis hypogaea HOM05D004234 ORTHO05D004670 9.5e-38 162.2 154 62.3
arahy.Tifrunner.gnm1.ann1.AYL6ZU Arachis hypogaea HOM05D004234 ORTHO05D004670 1.8e-36 157.9 156 62.8
Cpa.g.c29748.2 Carica papaya HOM05D004234 ORTHO05D004670 1.4e-33 148.3 85 89.4
Haze_13877 Corylus avellana HOM05D004234 ORTHO05D004670 3.2e-33 147.1 187 50.8
BolC1t03363H Brassica oleracea HOM05D004234 ORTHO05D004670 4.1e-33 146.7 74 95.9
FvH4_2g12100 Fragaria vesca HOM05D004234 ORTHO05D004670 1.3e-26 125.2 97 66.0
arahy.Tifrunner.gnm1.ann1.F7NEP8 Arachis hypogaea HOM05D004234 ORTHO05D004670 1.9e-22 111.3 103 62.1
SEGI_04441 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 3.6e-21 107.1 82 70.7
SEGI_30601 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 3.1e-20 104.0 58 86.2
FvH4_c2g00051 Fragaria vesca HOM05D004234 ORTHO05D004670 2.9e-18 97.4 164 45.1
Dinv16843 Davidia involucrata HOM05D004234 ORTHO05D004670 4.9e-18 96.7 56 78.6
SEGI_33806 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.4e-17 95.1 60 73.3
Gorai.011G181500 Gossypium raimondii HOM05D001733 ORTHO05D004670 5.4e-17 93.2 51 84.3
Migut.L01142 Erythranthe guttata HOM05D004234 ORTHO05D004670 6.0e-16 89.7 64 67.2
Gorai.009G415200 Gossypium raimondii HOM05D004234 ORTHO05D004670 2.3e-15 87.8 51 82.4
FvH4_3g27272 Fragaria vesca HOM05D004234 ORTHO05D004670 6.6e-15 86.3 157 43.3
Lsat_1_v5_gn_5_94641 Lactuca sativa HOM05D004234 ORTHO05D004670 6.6e-15 86.3 59 66.1
SEGI_09779 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 8.6e-15 85.9 65 63.1
Gorai.012G056500 Gossypium raimondii HOM05D004234 ORTHO05D004670 1.1e-14 85.5 51 80.4
Gohir.D04G050932 Gossypium hirsutum HOM05D004234 ORTHO05D004670 9.5e-14 82.4 55 72.7
Actinidia24997 Actinidia chinensis HOM05D004234 ORTHO05D004670 2.8e-13 80.9 60 71.7
Haze_13878 Corylus avellana HOM05D004234 ORTHO05D004670 1.1e-12 79.0 41 90.2
Gohir.D11G243650 Gossypium hirsutum HOM05D001733 ORTHO05D004670 1.8e-12 78.2 51 74.5
FvH4_5g28373 Fragaria vesca HOM05D004234 ORTHO05D004670 1.7e-10 71.6 191 36.1
PRCOL_00000881 Prasinoderma coloniale HOM05D004234 ORTHO05D004670 6.4e-10 69.7 81 51.9
Cpa.g.sc111.54 Carica papaya HOM05D004234 ORTHO05D004670 7.1e-09 66.2 140 37.1
Peaxi162Scf00304g01326 Petunia axillaris HOM05D004234 ORTHO05D004670 2.7e-08 64.3 40 77.5
Rhsim06G0134300 Rhododendron simsii HOM05D000157 ORTHO05D000311 8.6e-07 59.3 36 80.6
Nitab4.5_0003490g0040 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.9e-06 58.2 30 86.7


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