Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 5.9e-197 691.0 448 100.0
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 7.0e-158 561.2 448 78.8
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 5.1e-156 555.1 448 81.9
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.6e-154 550.1 450 79.3
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 3.0e-148 529.3 450 76.4
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 3.3e-147 525.8 444 76.6
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 6.2e-146 521.5 454 76.0
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 1.4e-145 520.4 449 78.0
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 4.0e-145 518.8 446 73.8
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 3.4e-144 515.8 447 71.8
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 3.2e-142 509.2 328 82.3
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 6.0e-141 505.0 452 73.5
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 1.0e-140 504.2 329 83.0
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 3.9e-140 502.3 325 82.5
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 2.8e-138 496.1 325 81.5
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 2.8e-138 496.1 325 81.5
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 8.1e-138 494.6 448 66.3
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 2.5e-131 473.0 441 71.0
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 4.3e-131 472.2 442 70.8
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 2.3e-116 423.3 448 62.5
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 6.7e-116 421.8 334 67.1
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 1.3e-114 417.5 331 65.0
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 2.8e-114 416.4 327 67.3
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 4.8e-114 415.6 328 66.8
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 2.4e-113 413.3 330 64.8
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 5.3e-113 412.1 340 65.6
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 4.5e-112 409.1 319 66.8
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 7.6e-112 408.3 336 63.7
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.3e-111 407.5 326 66.9
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 1.7e-111 407.1 320 67.8
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 6.5e-111 405.2 329 65.3
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 1.4e-110 404.1 326 64.4
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 1.9e-110 403.7 327 63.6
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 3.2e-110 402.9 334 65.0
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 4.2e-110 402.5 331 64.7
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 7.1e-110 401.7 309 73.8
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 7.1e-110 401.7 326 64.1
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 9.3e-110 401.4 317 67.5
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 1.2e-109 401.0 334 63.8
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 2.7e-109 399.8 345 62.3
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 6.0e-109 398.7 329 64.1
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 1.8e-108 397.1 328 64.3
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 2.3e-108 396.7 334 65.3
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 5.1e-108 395.6 333 63.1
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 6.7e-108 395.2 338 63.0
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 4.3e-107 392.5 326 64.1
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 7.4e-107 391.7 355 59.7
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 9.7e-107 391.3 334 63.8
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 1.3e-106 391.0 334 63.2
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 1.6e-106 390.6 323 63.2
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 3.7e-106 389.4 326 64.7
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 4.8e-106 389.0 328 64.3
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.1e-105 387.9 338 62.1
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.4e-105 387.5 338 61.8
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 1.4e-105 387.5 334 63.2
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.8e-105 387.1 322 64.0
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 2.4e-105 386.7 330 62.4
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 2.4e-105 386.7 336 60.4
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 2.4e-105 386.7 336 62.2
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 4.1e-105 386.0 349 60.2
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 4.1e-105 386.0 338 62.1
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 4.1e-105 386.0 335 60.9
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 1.5e-104 384.0 313 64.5
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.6e-104 383.3 331 61.9
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 2.6e-104 383.3 334 62.0
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 7.7e-104 381.7 323 61.9
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 1.0e-103 381.3 327 59.9
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 1.7e-103 380.6 330 61.8
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 2.9e-103 379.8 330 61.8
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 6.5e-103 378.6 332 61.7
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 6.5e-103 378.6 332 61.4
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 1.4e-102 377.5 335 61.2
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 1.4e-102 377.5 331 61.3
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 1.9e-102 377.1 330 60.0
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 2.5e-102 376.7 329 59.9
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 2.5e-102 376.7 331 58.6
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 4.2e-102 375.9 325 60.6
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 7.2e-102 375.2 332 61.7
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 4.6e-101 372.5 329 59.0
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 2.3e-100 370.2 374 55.6
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 5.1e-100 369.0 330 60.6
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 6.7e-100 368.6 314 62.7
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 8.8e-100 368.2 334 60.2
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 2.5e-99 366.7 311 62.1
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 4.3e-99 365.9 324 59.9
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 2.2e-98 363.6 349 57.6
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 2.8e-98 363.2 334 58.1
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 2.8e-98 363.2 324 59.6
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 3.7e-98 362.8 345 58.3
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 1.1e-97 361.3 337 57.0
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 6.9e-97 358.6 315 59.4
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 3.4e-96 356.3 282 64.5
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 3.4e-96 356.3 355 55.2
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 1.0e-95 354.8 289 62.6
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 2.9e-95 353.2 337 57.6
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 4.2e-94 349.4 314 59.6
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 2.1e-93 347.1 360 54.4
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 6.1e-93 345.5 333 56.2
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 8.8e-92 341.7 301 60.1
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 2.6e-91 340.1 346 54.6
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 5.7e-91 339.0 292 59.6
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 3.7e-90 336.3 446 47.1
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 3.7e-90 336.3 294 60.9
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 4.1e-89 332.8 285 62.5
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 1.2e-88 331.3 322 58.1
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 4.5e-88 329.3 292 58.2
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 1.3e-87 327.8 292 59.2
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 3.8e-87 326.2 312 57.1
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 9.1e-81 305.1 331 51.1
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 6.5e-79 298.9 340 51.2
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 5.0e-71 272.7 294 53.4
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 5.7e-67 259.2 225 60.9
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 4.2e-62 243.0 333 41.1
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 1.4e-60 238.0 230 57.0
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 4.9e-58 229.6 322 39.8
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 1.6e-56 224.6 215 60.0
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.3e-52 210.7 161 72.0
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 7.0e-49 199.1 301 41.5
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.0e-43 181.0 139 66.9
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 3.4e-43 180.3 157 63.1
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.7e-39 167.9 155 60.6
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 3.3e-38 163.7 168 56.0
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 9.5e-38 162.2 155 60.0
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 6.2e-37 159.5 112 75.0
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.3e-36 157.5 111 67.6
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 1.2e-35 155.2 382 31.7
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 2.6e-35 154.1 255 38.0
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 6.4e-34 149.4 361 31.6
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 2.2e-26 124.4 98 64.3
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 4.2e-25 120.2 87 70.1
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 5.4e-25 119.8 202 39.1
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 4.8e-21 106.7 171 38.0
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 2.4e-20 104.4 177 39.0
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.9e-18 97.4 68 67.6
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 6.4e-18 96.3 77 64.9
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 4.2e-17 93.6 155 38.7
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 9.3e-17 92.4 135 44.4
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 1.2e-16 92.0 90 53.3
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 1.6e-16 91.7 68 72.1
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 2.7e-16 90.9 68 66.2
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 1.3e-15 88.6 62 67.7
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 1.7e-15 88.2 135 42.2
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 2.3e-15 87.8 329 25.8
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 3.0e-15 87.4 62 67.7
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 3.9e-15 87.0 61 68.9
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 5.1e-15 86.7 68 67.6
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 1.1e-14 85.5 60 68.3
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 4.8e-13 80.1 357 27.7
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 5.3e-12 76.6 108 44.4
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.7e-10 71.6 89 47.2
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 1.2e-08 65.5 115 32.2
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea HOM05D001638 ORTHO05D005197 9.6e-06 55.8 43 62.8


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