Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 2.8e-93 345.5 204 100.0
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 3.3e-46 189.1 203 68.0
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.4e-44 183.0 204 67.6
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.4e-44 183.0 204 67.6
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 6.9e-44 181.4 204 67.2
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.2e-43 180.6 204 67.2
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.0e-43 179.9 204 65.2
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.7e-42 176.8 204 64.7
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.3e-39 166.4 227 59.9
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.9e-39 165.6 142 66.2
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 5.1e-39 165.2 215 49.3
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 8.2e-29 131.3 215 41.9
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 2.6e-19 99.8 132 50.8
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 2.6e-19 99.8 132 50.8
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 2.6e-19 99.8 132 50.8
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 4.5e-19 99.0 146 47.3
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 6.5e-18 95.1 205 41.0
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 2.5e-17 93.2 133 48.1
AL3G41400 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 4.2e-17 92.4 227 48.0
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 1.0e-15 87.8 142 46.5
AL215U10060 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.3e-15 86.7 204 49.0
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 4.0e-15 85.9 131 42.7
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 1.5e-14 84.0 102 47.1
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 2.8e-13 79.7 143 44.1
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 3.8e-10 69.3 191 30.9
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 8.5e-10 68.2 132 34.1
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 3.2e-09 66.2 133 36.1
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.6e-08 62.8 129 31.8
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 6.1e-08 62.0 128 34.4
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 6.1e-08 62.0 136 34.6
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 3.0e-07 59.7 75 44.0
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 4.0e-07 59.3 83 42.2
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 5.2e-07 58.9 76 42.1
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 6.8e-07 58.5 160 31.9
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 8.8e-07 58.2 133 34.6
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 8.8e-07 58.2 68 42.6
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.2e-06 57.8 126 31.7
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 2.0e-06 57.0 126 33.3
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 2.0e-06 57.0 126 33.3
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.6e-06 56.6 126 31.7
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.6e-06 56.6 113 35.4
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 3.4e-06 56.2 115 34.8
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 3.4e-06 56.2 137 35.0
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 4.4e-06 55.8 71 38.0
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 7.5e-06 55.1 131 30.5
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 9.8e-06 54.7 132 31.1


User provided reference genes

Program Settings