Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2070 Capsella rubella HOM05D008865 ORTHO05D011106 6.0e-85 317.4 152 100.0
AT5G60000 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 1.5e-64 249.6 150 82.7
AL8G36590 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 5.0e-63 244.6 141 82.3
AL6G34100 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 1.8e-36 156.4 141 56.0
Carub.0006s2074 Capsella rubella HOM05D008865 ORTHO05D011106 3.0e-36 155.6 143 55.9
AT5G22970 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 4.0e-36 155.2 150 54.0
CARHR190570 Cardamine hirsuta HOM05D008865 ORTHO05D011106 3.7e-34 148.7 143 53.1
Sp6g22410 Schrenkiella parvula HOM05D008865 ORTHO05D011106 1.1e-33 147.1 146 55.5
THA.LOC104811283 Tarenaya hassleriana HOM05D008865 ORTHO05D011106 1.8e-33 146.4 125 54.4
BcaC04g19616 Brassica carinata HOM05D008865 ORTHO05D011106 4.1e-33 145.2 154 51.3
C09p53610 Brassica napus HOM05D008865 ORTHO05D011106 4.1e-33 145.2 154 51.3
BolC9t58237H Brassica oleracea HOM05D008865 ORTHO05D011106 4.1e-33 145.2 154 51.3
BraA06t24016Z Brassica rapa HOM05D008865 ORTHO05D011106 4.1e-33 145.2 153 51.6
Thhalv10015539m.g Eutrema salsugineum HOM05D008865 ORTHO05D011106 1.2e-32 143.7 151 55.6
A10p18060 Brassica napus HOM05D008865 ORTHO05D011106 3.5e-32 142.1 153 51.6
Aa31LG7G12520 Aethionema arabicum HOM05D008865 ORTHO05D011106 1.7e-31 139.8 150 49.3
BraA10t43880Z Brassica rapa HOM05D008865 ORTHO05D011106 2.2e-31 139.4 153 51.0
A03p10990 Brassica napus HOM05D008865 ORTHO05D011106 6.5e-31 137.9 159 52.8
BraA03t10412Z Brassica rapa HOM05D008865 ORTHO05D011106 6.5e-31 137.9 159 52.8
BraA03t10413Z Brassica rapa HOM05D008865 ORTHO05D011106 6.5e-31 137.9 159 52.8
BcaB08g36386 Brassica carinata HOM05D008865 ORTHO05D011106 1.9e-30 136.3 154 48.7
BcaB08g36388 Brassica carinata HOM05D008865 ORTHO05D011106 1.9e-30 136.3 154 48.7
BcaB08g36389 Brassica carinata HOM05D008865 ORTHO05D011106 1.9e-30 136.3 154 48.7
A03p11010 Brassica napus HOM05D008865 ORTHO05D011106 5.5e-30 134.8 159 52.2
BcaB01g04678 Brassica carinata HOM05D008865 ORTHO05D011106 2.3e-28 129.4 159 51.6
BcaB01g04681 Brassica carinata HOM05D008865 ORTHO05D011106 6.8e-28 127.9 148 53.4
BraA03t10408Z Brassica rapa HOM05D008865 ORTHO05D011106 1.3e-26 123.6 155 49.7
BcaC01g06558 Brassica carinata HOM05D008865 ORTHO05D011106 8.3e-26 120.9 158 48.1
C03p12650 Brassica napus HOM05D008865 ORTHO05D011106 8.3e-26 120.9 158 48.1
C03p12670 Brassica napus HOM05D008865 ORTHO05D011106 8.3e-26 120.9 158 48.1
BolC3t13733H Brassica oleracea HOM05D008865 ORTHO05D011106 8.3e-26 120.9 158 48.1
Thecc.09G331500 Theobroma cacao HOM05D008865 ORTHO05D011106 2.8e-18 95.9 145 35.9
BcaC01g06556 Brassica carinata HOM05D008865 ORTHO05D011106 2.3e-15 86.3 119 47.1
BraA03t10415Z Brassica rapa HOM05D008865 ORTHO05D011106 9.5e-14 80.9 77 61.0
A03p10980 Brassica napus HOM05D008865 ORTHO05D011106 1.0e-12 77.4 70 61.4
BraA03t10409Z Brassica rapa HOM05D008865 ORTHO05D011106 1.0e-12 77.4 70 61.4
BolC3t13736H Brassica oleracea HOM05D008865 ORTHO05D011106 3.0e-12 75.9 99 49.5
C03p12700 Brassica napus HOM05D008865 ORTHO05D011106 9.8e-11 70.9 77 54.5
Aa31sc23G400 Aethionema arabicum HOM05D008865 ORTHO05D011106 5.6e-06 55.1 66 53.0
Thhalv10015890m.g Eutrema salsugineum HOM05D008865 ORTHO05D195781 7.3e-06 54.7 39 66.7


User provided reference genes

Program Settings