Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.9e-44 182.2 96 100.0
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 4.7e-43 177.6 96 95.8
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 6.1e-43 177.2 96 94.8
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.0e-42 176.4 96 94.8
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.4e-42 176.0 96 94.8
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.2e-41 172.9 94 94.7
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 8.3e-40 166.8 96 87.5
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 5.4e-39 164.1 96 88.5
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 7.0e-39 163.7 96 87.5
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 9.2e-39 163.3 94 87.2
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 1.2e-38 162.9 94 87.2
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 4.5e-38 161.0 94 88.3
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 4.5e-38 161.0 94 88.3
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.0e-37 159.8 95 84.2
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 2.5e-36 155.2 92 84.8
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 2.8e-35 151.8 92 82.6
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 2.8e-35 151.8 92 82.6
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 3.6e-35 151.4 92 82.6
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.4e-34 149.4 92 80.4
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 2.3e-34 148.7 92 78.3
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 3.1e-34 148.3 92 81.5
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 4.0e-34 147.9 92 78.3
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 5.2e-34 147.5 92 79.3
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 6.8e-34 147.1 91 80.2
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 8.9e-34 146.7 92 77.2
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 8.9e-34 146.7 90 80.0
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 8.9e-34 146.7 95 75.8
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.2e-33 146.4 90 81.1
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.5e-33 146.0 92 78.3
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.5e-33 146.0 92 77.2
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 2.0e-33 145.6 92 78.3
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.0e-33 145.6 92 79.3
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 2.6e-33 145.2 90 81.1
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 5.8e-33 144.1 94 83.0
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 5.8e-33 144.1 92 77.2
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 5.8e-33 144.1 92 78.3
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 7.5e-33 143.7 92 77.2
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 7.5e-33 143.7 91 76.9
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 7.5e-33 143.7 92 78.3
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.5e-33 143.7 91 75.8
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 9.8e-33 143.3 90 78.9
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.3e-32 142.9 90 77.8
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.3e-32 142.9 90 76.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.7e-32 142.5 90 77.8
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.7e-32 142.5 92 76.1
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.7e-32 142.5 91 75.8
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 2.9e-32 141.7 91 75.8
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 2.9e-32 141.7 92 77.2
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 2.9e-32 141.7 91 73.6
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 2.9e-32 141.7 91 75.8
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.9e-32 141.7 92 75.0
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.7e-32 141.4 92 75.0
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 4.9e-32 141.0 91 75.8
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 4.9e-32 141.0 92 75.0
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 8.3e-32 140.2 91 75.8
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.1e-31 139.8 92 73.9
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 1.4e-31 139.4 90 76.7
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.4e-31 138.7 92 73.9
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 2.4e-31 138.7 91 74.7
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 3.2e-31 138.3 92 72.8
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 5.4e-31 137.5 94 73.4
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 5.4e-31 137.5 92 71.7
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 7.0e-31 137.1 91 73.6
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 7.0e-31 137.1 92 73.9
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 1.2e-30 136.3 90 74.4
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.2e-30 136.3 92 72.8
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.2e-30 136.3 91 72.5
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 1.6e-30 136.0 90 74.4
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 2.7e-30 135.2 153 54.2
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 3.5e-30 134.8 92 72.8
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 3.5e-30 134.8 92 72.8
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 3.5e-30 134.8 89 76.4
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 4.6e-30 134.4 92 72.8
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 6.0e-30 134.0 94 72.3
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 7.8e-30 133.7 92 71.7
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.3e-29 132.9 91 69.2
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.7e-29 132.5 93 71.0
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.7e-29 132.5 92 70.7
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 2.3e-29 132.1 92 71.7
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 5.0e-29 131.0 89 73.0
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 8.6e-29 130.2 92 69.6
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 1.1e-28 129.8 92 69.6
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.5e-28 129.4 92 70.7
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.5e-28 129.4 92 68.5
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 2.5e-28 128.6 93 68.8
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 4.3e-28 127.9 92 68.5
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 5.6e-28 127.5 90 71.1
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 9.5e-28 126.7 89 70.8
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 1.2e-27 126.3 92 69.6
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 3.1e-26 121.7 92 63.0
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 3.1e-26 121.7 76 78.9
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.4e-25 118.2 76 77.6
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 3.4e-25 118.2 76 77.6
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.7e-24 115.9 91 63.7
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 6.4e-24 114.0 76 76.3
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 6.4e-24 114.0 76 77.6
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.1e-23 113.2 75 76.0
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.4e-23 112.1 80 71.2
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.2e-22 109.8 91 60.4
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.2e-22 109.8 75 70.7
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 4.6e-22 107.8 92 58.7
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.3e-21 105.5 74 70.3
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.9e-21 104.8 93 61.3
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 5.1e-21 104.4 78 65.4
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 6.6e-21 104.0 74 68.9
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.9e-20 102.4 64 78.1
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 8.1e-19 97.1 73 64.4
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.1e-18 96.7 75 68.0
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 1.1e-18 96.7 56 89.3
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 1.1e-18 96.7 90 57.8
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 3.1e-18 95.1 64 71.9
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 8.3e-16 87.0 87 51.7
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.1e-15 86.7 100 51.0
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 4.1e-15 84.7 78 57.7
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 4.6e-14 81.3 62 71.0
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 2.4e-10 68.9 86 48.8
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 1.2e-09 66.6 87 42.5
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 5.8e-09 64.3 34 94.1
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 9.9e-09 63.5 37 81.1
BolC9t57826H Brassica oleracea HOM05D006914 ORTHO05D008583 5.4e-07 57.8 30 86.7
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 7.8e-06 53.9 108 34.3


User provided reference genes

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