Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.8e-92 342.4 161 100.0
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.4e-92 342.0 161 99.4
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.0e-91 339.0 161 98.1
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 2.0e-91 339.0 161 98.1
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.7e-91 338.6 161 97.5
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.0e-90 336.7 161 96.9
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.0e-90 336.7 161 96.9
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 2.3e-90 335.5 161 96.9
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 6.6e-90 334.0 161 95.7
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 1.5e-89 332.8 161 95.0
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 7.3e-89 330.5 169 92.9
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 3.6e-88 328.2 167 92.8
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 3.1e-87 325.1 161 93.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.8e-78 294.3 161 80.7
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 4.9e-77 291.2 162 81.5
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 4.1e-76 288.1 161 77.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 76.4
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 77.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 78.3
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 6.0e-75 284.3 162 79.0
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.0e-74 283.5 162 79.0
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.0e-74 283.5 154 80.5
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.3e-74 283.1 161 75.8
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.3e-74 283.1 160 75.0
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 75.2
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.3e-74 282.3 156 80.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 75.2
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 77.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 5.1e-74 281.2 161 75.2
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.1e-74 281.2 161 75.8
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.6e-74 280.8 148 83.8
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 8.6e-74 280.4 159 76.1
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 75.8
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 76.4
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.9e-73 279.3 159 77.4
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.9e-73 279.3 159 77.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.5e-73 278.9 159 75.5
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 76.4
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.3e-73 278.5 158 75.9
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.6e-73 277.7 158 75.9
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 7.3e-73 277.3 159 76.7
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 74.1
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 73.9
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 2.1e-72 275.8 161 75.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.1e-72 275.8 159 73.0
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 74.5
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.6e-72 275.0 158 74.1
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.6e-72 275.0 154 77.9
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 3.6e-72 275.0 160 74.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 3.6e-72 275.0 161 74.5
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.7e-72 274.6 161 75.8
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 4.7e-72 274.6 158 74.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 74.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 6.2e-72 274.2 158 74.1
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 76.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 76.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 76.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 76.4
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.1e-71 273.5 152 77.6
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.1e-71 273.5 160 73.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 1.1e-71 273.5 154 77.9
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 74.5
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 74.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.8e-71 272.7 158 75.3
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.4e-71 272.3 162 75.3
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 4.0e-71 271.6 161 73.3
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 6.8e-71 270.8 161 72.7
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 75.2
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 72.7
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 8.9e-71 270.4 155 74.8
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.2e-70 270.0 161 72.7
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 5.8e-70 267.7 162 72.2
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.6e-70 267.3 152 77.6
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 70.8
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.7e-69 266.2 161 74.5
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.7e-69 266.2 161 73.3
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.7e-69 266.2 157 72.6
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 72.7
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 4.9e-69 264.6 152 75.0
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 4.9e-69 264.6 158 72.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.1e-68 263.5 161 68.9
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.9e-68 262.7 161 72.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.9e-68 262.7 160 75.0
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.4e-68 262.3 161 68.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 9.2e-68 260.4 158 71.5
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-67 260.0 155 72.3
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.0e-66 256.9 162 69.1
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.3e-66 255.8 161 75.2
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 5.1e-66 254.6 155 70.3
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.9e-65 252.7 214 54.7
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 9.6e-65 250.4 161 70.8
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 9.6e-65 250.4 162 67.3
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.2e-64 250.0 148 76.4
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.1e-63 246.9 156 69.2
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 3.1e-63 245.4 149 70.5
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 5.2e-63 244.6 135 79.3
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 5.8e-62 241.1 138 76.1
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 6.4e-61 237.7 155 67.1
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.2e-60 235.3 135 74.1
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.2e-60 235.0 135 74.1
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 7.1e-60 234.2 138 73.9
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 3.9e-58 228.4 138 73.2
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.6e-56 221.9 151 68.2
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.4e-55 219.2 117 82.1
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.9e-53 212.2 121 74.4
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.2e-51 206.8 141 62.4
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.2e-51 206.8 183 56.3
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 4.6e-51 204.9 140 65.7
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 7.9e-51 204.1 153 58.8
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.8e-50 203.0 157 69.4
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.3e-50 202.6 116 75.9
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.0e-50 202.2 114 76.3
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 8.7e-50 200.7 141 61.0
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 5.6e-49 198.0 115 75.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.1e-48 194.1 160 59.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.4e-46 188.7 105 77.1
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.2e-45 186.0 138 60.9
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 2.2e-45 186.0 114 70.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 4.9e-45 184.9 96 82.3
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 2.4e-44 182.6 95 82.1
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.6e-40 169.9 100 73.0
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.9e-36 156.4 132 57.6
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.5e-36 156.0 85 82.4
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.1e-33 147.1 135 53.3
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.5e-33 146.0 86 75.6
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 5.5e-28 128.3 73 78.1
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.1e-23 114.0 60 90.0
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.4e-18 97.1 52 75.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.4e-15 87.0 71 63.4


User provided reference genes

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