Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 5.9e-245 850.5 458 100.0
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 8.5e-167 590.9 445 76.0
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.1e-163 580.5 497 69.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 3.2e-158 562.4 499 67.9
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 4.2e-158 562.0 446 73.1
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 7.2e-150 534.6 457 68.7
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.9e-143 512.7 449 69.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 5.7e-139 498.4 476 64.1
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.1e-137 494.2 457 65.4
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 5.4e-137 491.9 457 65.2
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 1.9e-65 254.2 342 53.2
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.8e-28 131.3 178 44.9
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.2e-27 128.6 140 50.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.7e-27 127.5 281 36.3
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 2.7e-27 127.5 298 35.9
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.7e-27 127.5 148 48.6
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 2.9e-26 124.0 278 32.7
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.8e-26 123.6 282 34.4
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 5.0e-26 123.2 312 34.3
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.5e-25 121.7 448 29.9
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.5e-25 121.7 292 36.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 3.3e-25 120.6 346 32.1
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.2e-24 118.6 227 37.0
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-24 118.2 250 34.8
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.7e-24 116.7 228 34.2
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 6.1e-24 116.3 362 31.5
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 8.0e-24 115.9 459 30.9
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 8.0e-24 115.9 176 40.3
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.4e-23 115.2 174 41.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.8e-23 114.8 455 29.5
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.3e-23 114.4 235 34.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.3e-23 114.4 235 34.9
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 4.0e-23 113.6 480 30.2
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 6.8e-23 112.8 463 28.3
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 6.8e-23 112.8 478 25.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 8.9e-23 112.5 395 30.6
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.5e-22 111.7 448 28.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.5e-22 111.7 128 45.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.5e-22 111.7 409 28.1
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.0e-22 111.3 468 27.4
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.4e-22 110.5 143 41.3
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.4e-22 110.5 477 25.6
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.4e-22 110.5 126 49.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 5.7e-22 109.8 411 28.7
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 7.5e-22 109.4 141 43.3
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.3e-21 108.6 311 32.2
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.8e-21 107.5 463 28.1
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 3.7e-21 107.1 329 30.4
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 4.9e-21 106.7 128 43.0
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 8.3e-21 105.9 312 30.8
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.8e-20 104.8 229 33.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.4e-20 104.4 400 29.0
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.1e-20 104.0 182 36.3
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.1e-20 103.6 128 43.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 5.4e-20 103.2 389 28.5
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 5.4e-20 103.2 367 28.3
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.2e-19 102.1 329 29.8
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.2e-19 102.1 487 26.7
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.6e-19 101.7 314 30.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.6e-19 101.7 170 37.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.7e-19 100.9 145 40.0
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.5e-19 100.5 251 34.3
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 7.8e-19 99.4 348 27.9
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 7.8e-19 99.4 142 38.0
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 7.8e-19 99.4 441 26.8
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.3e-18 98.6 231 33.3
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.7e-18 98.2 408 27.0
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 8.6e-18 95.9 479 27.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.1e-17 95.5 417 28.8
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.9e-17 94.7 371 28.0
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 5.6e-17 93.2 471 27.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 9.5e-17 92.4 215 31.2
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 9.5e-17 92.4 477 25.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-16 92.0 411 28.5
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.6e-16 91.7 406 29.1
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 3.6e-16 90.5 448 24.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.1e-16 89.7 409 28.9
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.3e-15 87.8 416 26.7
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.0e-15 87.0 476 26.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 8.9e-15 85.9 318 25.2
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 2.6e-14 84.3 158 38.0
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.4e-14 83.6 333 26.4
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.3e-13 82.0 487 23.4
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.3e-13 82.0 218 26.6
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.7e-13 81.6 320 28.8
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.9e-13 80.9 514 25.3
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 8.3e-13 79.3 145 34.5
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.4e-12 78.6 76 46.1
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-12 78.2 435 26.9
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 4.6e-11 73.6 187 28.9
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 7.8e-11 72.8 127 32.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.0e-10 72.4 403 23.6
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 6.6e-10 69.7 332 26.8
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.3e-09 67.4 399 22.6
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.6e-09 66.6 412 27.4
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 7.3e-09 66.2 356 25.8
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.5e-09 65.9 140 30.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.5e-09 65.9 140 30.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.1e-08 64.7 126 31.0
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.8e-08 64.3 513 24.6
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.1e-07 62.4 425 24.7
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.1e-07 60.8 50 56.0
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 7.5e-06 56.2 261 25.3
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 7.5e-06 56.2 141 33.3


User provided reference genes

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