Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 5.4e-69 264.6 179 100.0
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 2.2e-62 242.7 179 87.2
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 6.5e-62 241.1 179 86.0
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.1e-61 240.4 179 86.6
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.1e-61 240.4 179 86.6
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.9e-61 239.6 203 78.3
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 6.0e-60 234.6 183 84.7
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 7.9e-60 234.2 203 76.8
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 5.1e-59 231.5 179 84.4
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 8.7e-59 230.7 180 86.7
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 8.7e-59 230.7 178 89.3
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.8e-56 223.0 207 74.4
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.4e-43 180.3 176 58.0
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 3.2e-37 159.1 181 61.9
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 2.9e-30 136.0 190 45.3
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.0e-27 125.9 192 43.8
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 3.0e-27 125.9 192 43.8
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 5.2e-27 125.2 190 43.7
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 6.7e-27 124.8 192 43.8
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 1.1e-26 124.0 187 44.9
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.1e-26 124.0 193 43.0
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 2.0e-26 123.2 186 44.6
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 3.3e-26 122.5 184 43.5
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 7.4e-26 121.3 185 41.1
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 7.4e-26 121.3 191 44.0
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 7.4e-26 121.3 192 42.7
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 9.7e-26 120.9 185 43.2
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.7e-25 120.2 190 42.6
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.7e-25 120.2 183 42.6
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 2.8e-25 119.4 189 41.8
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.8e-25 118.6 192 42.2
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 4.8e-25 118.6 190 42.6
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.2e-25 117.9 183 43.2
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 8.2e-25 117.9 183 39.3
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 1.1e-24 117.5 188 40.4
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.4e-24 117.1 179 40.2
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.8e-24 116.7 191 40.8
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 2.4e-24 116.3 184 41.3
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.1e-24 115.9 183 42.6
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.3e-24 115.2 187 41.2
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 7.0e-24 114.8 182 39.6
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 9.1e-24 114.4 197 45.2
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.0e-23 113.2 181 42.5
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.0e-23 113.2 185 42.2
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 2.6e-23 112.8 188 39.9
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.6e-23 112.8 188 39.9
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 3.5e-23 112.5 179 39.1
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 3.5e-23 112.5 192 39.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.5e-23 112.5 189 39.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 4.5e-23 112.1 183 38.8
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 4.5e-23 112.1 192 39.6
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 7.7e-23 111.3 188 39.9
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.0e-22 110.9 190 40.0
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.3e-22 110.5 188 41.0
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.3e-22 110.5 188 41.0
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.3e-22 110.5 190 40.5
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 2.2e-22 109.8 177 37.9
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 2.2e-22 109.8 177 37.9
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.2e-22 109.8 178 40.4
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.9e-22 109.4 188 38.8
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 2.9e-22 109.4 191 38.2
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 3.8e-22 109.0 188 41.5
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 5.0e-22 108.6 182 41.2
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 6.5e-22 108.2 181 39.2
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 8.5e-22 107.8 192 39.6
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 1.1e-21 107.5 191 38.7
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.2e-21 105.9 188 38.3
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.2e-21 105.9 177 37.9
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 4.2e-21 105.5 193 38.3
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 5.5e-21 105.1 191 38.7
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 5.5e-21 105.1 187 38.5
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 6.1e-20 101.7 180 49.4
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 3.0e-19 99.4 180 37.2
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 3.0e-19 99.4 188 36.2
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.2e-19 98.6 188 37.2
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.8e-19 98.2 188 37.2
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 2.0e-18 96.7 180 35.6
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.0e-18 96.7 180 41.1
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.0e-18 96.7 188 35.6
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 7.5e-18 94.7 182 37.4
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 9.8e-18 94.4 181 36.5
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.3e-17 94.0 186 34.9
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 1.7e-17 93.6 184 38.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 2.2e-17 93.2 184 33.7
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 2.2e-17 93.2 180 35.6
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 2.8e-17 92.8 188 36.7
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.4e-16 90.5 176 36.9
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 1.4e-16 90.5 199 38.7
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 1.8e-16 90.1 190 35.3
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 1.8e-16 90.1 183 34.4
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 3.1e-16 89.4 180 34.4
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 4.1e-16 89.0 185 35.7
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.4e-16 88.6 180 33.9
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 5.4e-16 88.6 194 37.1
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.2e-15 87.4 188 35.1
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.6e-15 87.0 188 35.1
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.0e-15 86.7 184 30.4
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.7e-15 86.3 188 35.1
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 5.9e-15 85.1 189 39.2
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.0e-14 84.3 182 40.1
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 2.2e-14 83.2 185 37.3
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.2e-14 83.2 180 35.0
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.9e-14 82.8 188 35.1
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 2.9e-14 82.8 187 33.2
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 3.8e-14 82.4 177 31.1
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 5.0e-14 82.0 172 32.6
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 6.5e-14 81.6 169 32.5
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 8.5e-14 81.3 180 34.4
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.5e-13 80.5 180 34.4
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 4.7e-12 75.5 185 28.6
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 3.0e-11 72.8 199 31.7
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 4.0e-11 72.4 72 55.6
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 4.0e-11 72.4 201 33.3
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.2e-10 70.9 177 33.3
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-10 70.9 185 32.4
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 1.5e-10 70.5 175 33.1
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.0e-10 70.1 184 32.6
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.6e-10 69.7 183 32.8
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 5.7e-10 68.6 183 30.1
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.7e-09 67.0 180 32.8
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 3.7e-09 65.9 180 28.9
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 6.3e-09 65.1 180 32.8
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 6.3e-09 65.1 177 31.1
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.1e-08 62.4 173 30.6
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 9.1e-08 61.2 169 29.0
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 3.5e-07 59.3 163 28.8
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 3.5e-07 59.3 34 70.6
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 4.5e-07 58.9 165 30.3


User provided reference genes

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