Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1454 Capsella rubella HOM05D011674 ORTHO05D013685 8.7e-51 203.4 104 100.0
AT5G54220 Arabidopsis thaliana HOM05D011674 ORTHO05D013685 2.7e-36 155.2 102 72.5
AL8G29490 Arabidopsis lyrata HOM05D011674 ORTHO05D013685 7.1e-29 130.6 103 63.1
A03p14740 Brassica napus HOM05D011674 ORTHO05D013685 2.7e-28 128.6 104 60.6
BraA03t10765Z Brassica rapa HOM05D011674 ORTHO05D013685 2.7e-28 128.6 104 60.6
AT1G24062 Arabidopsis thaliana HOM05D011674 ORTHO05D013685 1.1e-26 123.2 103 61.2
BolC3t14136H Brassica oleracea HOM05D011674 ORTHO05D013685 2.5e-26 122.1 104 59.6
C03p17220 Brassica napus HOM05D011674 ORTHO05D013685 4.8e-25 117.9 104 57.7
Thhalv10015265m.g Eutrema salsugineum HOM05D011674 ORTHO05D013685 1.4e-21 106.3 80 62.5
Aa31LG3G10180 Aethionema arabicum HOM05D011674 ORTHO05D013685 9.3e-21 103.6 102 50.0
CARHR267460 Cardamine hirsuta HOM05D011674 ORTHO05D013685 2.8e-17 92.0 74 71.6
BcaB01g04284 Brassica carinata HOM05D011674 ORTHO05D013685 1.2e-15 86.7 97 45.4
BcaC01g06294 Brassica carinata HOM05D011674 ORTHO05D013685 1.2e-15 86.7 97 45.4
C03p17250 Brassica napus HOM05D011674 ORTHO05D013685 4.5e-15 84.7 97 44.3
A03p14760 Brassica napus HOM05D011674 ORTHO05D013685 6.5e-14 80.9 97 42.3
BraA03t10768Z Brassica rapa HOM05D011674 ORTHO05D013685 6.5e-14 80.9 97 42.3
AT5G54215 Arabidopsis thaliana HOM05D010512 ORTHO05D013732 3.7e-09 65.1 94 36.2
AL8G29460 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 2.4e-08 62.4 94 36.2
Thhalv10015683m.g Eutrema salsugineum HOM05D010512 ORTHO05D013732 5.3e-08 61.2 94 37.2
AL8G29480 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 1.2e-07 60.1 66 42.4
Carub.0008s1455 Capsella rubella HOM05D047465 ORTHO05D038615 1.2e-07 60.1 65 47.7
AT1G02940 Arabidopsis thaliana HOM05D000498 ORTHO05D000354 1.5e-07 59.7 70 50.0
AL8G29500 Arabidopsis lyrata HOM05D047465 ORTHO05D038615 4.5e-07 58.2 65 44.6
AT2G25305 Arabidopsis thaliana HOM05D010512 ORTHO05D013732 4.5e-07 58.2 97 34.0
BcaB03g15748 Brassica carinata HOM05D000498 ORTHO05D000354 7.7e-07 57.4 71 46.5
AL4G16670 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 1.3e-06 56.6 66 39.4


User provided reference genes

Program Settings