Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1447 Capsella rubella HOM05D011561 ORTHO05D011237 2.1e-39 165.2 85 100.0
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 2.2e-28 128.6 85 81.2
BraA03t10770Z Brassica rapa HOM05D011561 ORTHO05D011237 6.4e-28 127.1 85 77.6
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 2.4e-27 125.2 86 77.9
Sp6g16220 Schrenkiella parvula HOM05D011561 ORTHO05D011237 3.9e-25 117.9 84 73.8
BcaC01g06288 Brassica carinata HOM05D011561 ORTHO05D011237 5.1e-25 117.5 85 71.8
BcaC01g06291 Brassica carinata HOM05D011561 ORTHO05D011237 5.1e-25 117.5 85 71.8
BolC3t14140H Brassica oleracea HOM05D011561 ORTHO05D011237 5.1e-25 117.5 85 71.8
AL8G29380 Arabidopsis lyrata HOM05D011561 ORTHO05D011237 1.1e-24 116.3 85 75.3
BcaB01g04281 Brassica carinata HOM05D011561 ORTHO05D011237 3.1e-22 108.2 85 69.4
CARHR267370 Cardamine hirsuta HOM05D011561 ORTHO05D011237 2.5e-19 98.6 85 63.5
BNapus_Darmor_BZH_scaffold_273p00050 Brassica napus HOM05D011561 ORTHO05D011237 1.1e-14 83.2 66 65.2
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 5.7e-08 60.8 85 44.7
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 9.7e-08 60.1 83 47.0
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 1.3e-07 59.7 93 45.2
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 1.8e-06 55.8 83 43.4
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.8e-06 55.8 90 43.3
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.4e-06 55.5 90 43.3
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 4.1e-06 54.7 85 42.4
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 6.9e-06 53.9 86 45.3


User provided reference genes

Program Settings