Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1433 Capsella rubella HOM05D008606 ORTHO05D011380 9.6e-68 260.0 128 100.0
AT5G54067 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 7.6e-49 197.2 128 76.6
AL8G29180 Arabidopsis lyrata HOM05D008606 ORTHO05D011380 1.9e-44 182.6 118 77.1
AT1G50220 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 3.1e-42 175.3 129 70.5
AL1G57810 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.5e-41 172.9 129 70.5
AT1G43171 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 1.6e-38 162.9 112 72.3
CARHR041480 Cardamine hirsuta HOM05D008606 ORTHO05D011380 1.1e-36 156.8 122 64.8
CARHR040260 Cardamine hirsuta HOM05D008606 ORTHO05D011380 3.3e-36 155.2 122 63.1
Thhalv10000689m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 7.2e-31 137.5 132 56.1
BcaB07g33665 Brassica carinata HOM05D008606 ORTHO05D011380 1.8e-29 132.9 119 56.3
Thhalv10000541m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 6.7e-29 131.0 131 55.0
BcaB04g20136 Brassica carinata HOM05D008606 ORTHO05D011380 1.1e-28 130.2 119 55.5
BcaB07g33664 Brassica carinata HOM05D008606 ORTHO05D011380 1.5e-28 129.8 119 55.5
Thhalv10000528m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 2.0e-28 129.4 131 55.0
BcaNung04519 Brassica carinata HOM05D008606 ORTHO05D011380 2.6e-28 129.0 119 55.5
BcaNung04520 Brassica carinata HOM05D008606 ORTHO05D011380 4.4e-28 128.3 119 54.6
A06p03610 Brassica napus HOM05D008606 ORTHO05D011380 4.4e-28 128.3 117 54.7
A06p03350 Brassica napus HOM05D008606 ORTHO05D011380 7.4e-28 127.5 117 54.7
BraA06t23543Z Brassica rapa HOM05D008606 ORTHO05D011380 7.4e-28 127.5 117 54.7
BraA06t23567Z Brassica rapa HOM05D008606 ORTHO05D011380 7.4e-28 127.5 117 54.7
A06p08700 Brassica napus HOM05D008606 ORTHO05D011380 1.7e-27 126.3 117 53.8
BraA06t24067Z Brassica rapa HOM05D008606 ORTHO05D011380 1.7e-27 126.3 117 53.8
A09p20670 Brassica napus HOM05D008606 ORTHO05D011380 2.2e-27 125.9 117 53.0
BraA09t37671Z Brassica rapa HOM05D008606 ORTHO05D011380 2.2e-27 125.9 117 53.0
Thhalv10000711m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.8e-26 122.9 131 53.4
AT2G21920 Arabidopsis thaliana HOM05D008606 ORTHO05D014886 7.7e-25 117.5 117 51.3
Carub.0004s0094 Capsella rubella HOM05D008606 ORTHO05D014886 2.2e-24 115.9 120 48.3
BcaC05g27441 Brassica carinata HOM05D008606 ORTHO05D011380 1.1e-23 113.6 114 50.0
C05p33960 Brassica napus HOM05D008606 ORTHO05D011380 1.1e-23 113.6 114 50.0
BolC5t32130H Brassica oleracea HOM05D008606 ORTHO05D011380 1.1e-23 113.6 114 50.0
Carub.0004s0103 Capsella rubella HOM05D008606 ORTHO05D014886 5.5e-23 111.3 117 48.7
Carub.0004s0095 Capsella rubella HOM05D008606 ORTHO05D014886 2.7e-22 109.0 117 47.0
CARHR112950 Cardamine hirsuta HOM05D008606 ORTHO05D014886 3.6e-22 108.6 118 50.0
A05p20220 Brassica napus HOM05D008606 ORTHO05D011380 8.0e-22 107.5 114 48.2
BraA05t20932Z Brassica rapa HOM05D008606 ORTHO05D011380 8.0e-22 107.5 114 48.2
Carub.0004s0101 Capsella rubella HOM05D008606 ORTHO05D014886 3.0e-21 105.5 117 47.9
BcaB02g11136 Brassica carinata HOM05D008606 ORTHO05D011380 2.6e-20 102.4 114 45.6
Carub.0006s2903 Capsella rubella HOM05D008606 ORTHO05D014886 1.7e-19 99.8 120 40.8
Carub.0006s2899 Capsella rubella HOM05D008606 ORTHO05D014886 3.5e-17 92.0 113 42.5
Carub.0240s0002 Capsella rubella HOM05D008606 ORTHO05D014886 3.5e-17 92.0 113 42.5
BcaNung02938 Brassica carinata HOM05D008606 ORTHO05D011380 1.0e-16 90.5 83 55.4
Carub.0006s2897 Capsella rubella HOM05D008606 ORTHO05D014886 1.3e-16 90.1 123 35.8
A06p03580 Brassica napus HOM05D008606 ORTHO05D011380 1.7e-16 89.7 82 53.7
Thhalv10000608m.g Eutrema salsugineum HOM05D008606 ORTHO05D014886 8.5e-16 87.4 91 47.3
Thhalv10000701m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 4.2e-15 85.1 97 47.4
Carub.0008s0087 Capsella rubella HOM05D008606 ORTHO05D114305 1.4e-13 80.1 122 35.2
Carub.0006s2911 Capsella rubella HOM05D008606 ORTHO05D014886 2.6e-12 75.9 117 37.6
AT1G50190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.1e-10 70.5 55 67.3
Carub.0006s2901 Capsella rubella HOM05D008606 ORTHO05D014886 6.1e-06 54.7 77 39.0


User provided reference genes

Program Settings